Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AL049634.3-201ENST00000604968 457 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 AC243725.1-201ENST00000637164 436 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 FAM205BP-202ENST00000399773 4009 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 CHN2-211ENST00000424025 2279 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PHF8Q9UPP1 MAPK10-316ENST00000641430 2285 ntBASIC10.67□□□□□ -0.7
PHF8Q9UPP1 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AL162632.3-201ENST00000566976 1625 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 SMIM2-AS1-203ENST00000618753 2101 ntTSL 4 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 SOCS5P5-201ENST00000402732 1586 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 NF1P1-201ENST00000604105 2645 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 RNA5SP396-201ENST00000364834 120 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 SUGT1P2-201ENST00000379452 992 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 Y_RNA.453-201ENST00000384223 109 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 Y_RNA.548-201ENST00000384656 105 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 MICG-208ENST00000416822 132 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 RPL21P32-201ENST00000419877 477 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AC233728.2-201ENST00000425348 757 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AC073614.1-201ENST00000438690 650 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 GDI2P2-201ENST00000445131 608 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 RPLP0P1-201ENST00000457002 361 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 RPSAP37-201ENST00000470913 821 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 MTCO3P15-201ENST00000526563 574 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AP006587.5-201ENST00000532033 739 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 FDPSP3-201ENST00000556903 1013 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AC013553.2-201ENST00000604244 589 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AC006335.3-201ENST00000613408 292 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AC009033.1-201ENST00000624279 431 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 NXF4-202ENST00000416098 1465 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 AP002001.2-201ENST00000529025 1469 ntBASIC10.66□□□□□ -0.7
PHF8Q9UPP1 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 OGDH-206ENST00000447398 3474 ntTSL 5 BASIC10.66□□□□□ -0.7
PHF8Q9UPP1 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 ZNF726-206ENST00000594466 2473 ntTSL 5 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 PABPC4L-201ENST00000421491 4944 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 FOXR2-201ENST00000339140 1926 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 OR10J6P-201ENST00000289731 930 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 RNU6-253P-201ENST00000384730 105 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 H2AFZP3-201ENST00000394213 387 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 OLA1P1-201ENST00000396387 1189 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 PPIAP30-201ENST00000415473 519 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 MAPK6PS6-201ENST00000420752 1053 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AL359633.1-201ENST00000421403 310 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 EIF4A1P10-201ENST00000428832 1216 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC10.65□□□□□ -0.7
PHF8Q9UPP1 TCEA1P3-201ENST00000443005 880 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 CDC42P1-201ENST00000456658 548 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 WBP1LP1-201ENST00000460451 896 ntBASIC10.65□□□□□ -0.7
PHF8Q9UPP1 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms