Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 AC022905.1-201ENST00000503430 3048 ntBASIC7.98□□□□□ -1.13
SCN11AQ9UI33 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 CTAGE11P-201ENST00000451540 2353 ntBASIC7.98□□□□□ -1.13
SCN11AQ9UI33 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 MIR433-201ENST00000384837 93 ntBASIC7.98□□□□□ -1.13
SCN11AQ9UI33 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.98□□□□□ -1.13
SCN11AQ9UI33 AC092967.1-201ENST00000449016 481 ntBASIC7.98□□□□□ -1.13
SCN11AQ9UI33 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.98□□□□□ -1.13
SCN11AQ9UI33 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 MIR6793-201ENST00000612376 63 ntBASIC7.98□□□□□ -1.13
SCN11AQ9UI33 RNA5SP440-201ENST00000612665 119 ntBASIC7.98□□□□□ -1.13
SCN11AQ9UI33 MIR6798-201ENST00000612887 67 ntBASIC7.98□□□□□ -1.13
SCN11AQ9UI33 AL512624.1-201ENST00000613638 469 ntBASIC7.98□□□□□ -1.13
SCN11AQ9UI33 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 TRIM60P16-201ENST00000444048 694 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 HMGN1P36-201ENST00000446623 298 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 FTLP8-201ENST00000446770 267 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 MTATP6P1-201ENST00000514057 681 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AC126175.1-201ENST00000617041 758 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AP002364.1-201ENST00000623330 3386 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AC011369.2-201ENST00000624423 1567 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 Z93019.1-201ENST00000416450 973 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AC079355.1-201ENST00000421770 223 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AL139415.1-201ENST00000424862 352 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AC097721.1-201ENST00000427150 1253 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 SUMO2P3-201ENST00000438311 288 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AC023141.9-201ENST00000458734 412 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 RN7SL273P-201ENST00000481561 299 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AC020916.2-201ENST00000591242 360 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AC011445.2-201ENST00000599274 173 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AC013244.1-201ENST00000604279 193 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 AC092681.3-201ENST00000609463 678 ntBASIC7.97□□□□□ -1.13
SCN11AQ9UI33 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SCN11AQ9UI33 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.13
SCN11AQ9UI33 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
SCN11AQ9UI33 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SCN11AQ9UI33 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
SCN11AQ9UI33 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SCN11AQ9UI33 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
SCN11AQ9UI33 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.96□□□□□ -1.14
SCN11AQ9UI33 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
SCN11AQ9UI33 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.96□□□□□ -1.14
SCN11AQ9UI33 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SCN11AQ9UI33 AC105235.1-201ENST00000623208 1816 ntBASIC7.96□□□□□ -1.14
SCN11AQ9UI33 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SCN11AQ9UI33 RN7SKP278-201ENST00000410504 342 ntBASIC7.96□□□□□ -1.14
SCN11AQ9UI33 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
SCN11AQ9UI33 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.96□□□□□ -1.14
SCN11AQ9UI33 COX6B1P2-201ENST00000489624 230 ntBASIC7.96□□□□□ -1.14
SCN11AQ9UI33 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.96□□□□□ -1.14
SCN11AQ9UI33 SUMO2P7-201ENST00000511179 285 ntBASIC7.96□□□□□ -1.14
SCN11AQ9UI33 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.96□□□□□ -1.14
SCN11AQ9UI33 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.96□□□□□ -1.14
SCN11AQ9UI33 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.96□□□□□ -1.14
SCN11AQ9UI33 AC027544.3-201ENST00000535082 757 ntBASIC7.96□□□□□ -1.14
SCN11AQ9UI33 AL356801.1-201ENST00000559320 294 ntBASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms