Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 AC009108.3-201ENST00000602739 3515 ntBASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
RIMBP3Q9UFD9 MRRF-207ENST00000373729 870 ntTSL 3 BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 COX6CP17-201ENST00000421389 185 ntBASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 AC011753.3-201ENST00000443436 406 ntBASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 NDUFA5P9-201ENST00000472609 340 ntBASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 RN7SL57P-201ENST00000493687 290 ntBASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 PGAM1P13-201ENST00000507497 754 ntBASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 AC209154.1-201ENST00000582156 337 ntBASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 AC126915.2-201ENST00000610957 190 ntBASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 AC083809.1-201ENST00000615051 472 ntBASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 PANDAR-201ENST00000629595 1506 ntBASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 AC016739.1-201ENST00000405359 345 ntBASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 AL355375.1-201ENST00000405686 392 ntBASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 RN7SKP27-201ENST00000410684 333 ntBASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 AC113412.1-201ENST00000425840 504 ntBASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 HMGB3P24-201ENST00000433260 622 ntBASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 AC021146.10-201ENST00000515628 706 ntBASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC9.74□□□□□ -0.85
RIMBP3Q9UFD9 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 AC020978.8-201ENST00000571975 3022 ntBASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 SNRPEP6-201ENST00000407465 277 ntBASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 RPL36P18-201ENST00000419316 318 ntBASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 AL049745.1-201ENST00000433953 286 ntBASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 GAPDHP23-201ENST00000444823 993 ntBASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 AC055733.3-201ENST00000505214 523 ntBASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 LECT2-203ENST00000512872 762 ntTSL 5 BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 BNIP3P1-201ENST00000547295 580 ntBASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 AC063949.1-201ENST00000552900 865 ntBASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 AL450226.2-201ENST00000622913 439 ntBASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
RIMBP3Q9UFD9 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
RIMBP3Q9UFD9 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
RIMBP3Q9UFD9 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
RIMBP3Q9UFD9 MELK-207ENST00000536860 2342 ntTSL 2 BASIC9.72□□□□□ -0.85
RIMBP3Q9UFD9 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RIMBP3Q9UFD9 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
RIMBP3Q9UFD9 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
RIMBP3Q9UFD9 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RIMBP3Q9UFD9 RN7SKP77-201ENST00000363261 353 ntBASIC9.72□□□□□ -0.85
RIMBP3Q9UFD9 RN7SKP128-201ENST00000364270 303 ntBASIC9.72□□□□□ -0.85
RIMBP3Q9UFD9 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC9.72□□□□□ -0.85
RIMBP3Q9UFD9 SNORA11C-201ENST00000408532 129 ntBASIC9.72□□□□□ -0.85
RIMBP3Q9UFD9 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms