Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 USP13-203ENST00000496897 2747 ntTSL 2 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 MAPK10-347ENST00000641762 2856 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 AC079949.2-201ENST00000617117 2933 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 RNA5SP172-201ENST00000365061 118 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 BMS1P19-201ENST00000433925 393 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 PRPF38AP2-201ENST00000438179 851 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 RN7SL193P-201ENST00000491708 276 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 BX510359.5-201ENST00000515651 304 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 IGHV4-55-201ENST00000520889 368 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 OR4A2P-201ENST00000527276 913 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 AC087392.3-202ENST00000358446 1754 ntBASIC5.94□□□□□ -1.46
CHD8Q9HCK8 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHD8Q9HCK8 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AC090983.1-201ENST00000623426 3897 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AL359694.2-201ENST00000567753 1615 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 CYCSP17-201ENST00000407870 315 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AC021146.10-201ENST00000515628 706 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 SS18L2P2-201ENST00000583960 235 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AC087565.3-203ENST00000641018 837 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 PEG10-208ENST00000615790 6394 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AP002833.3-201ENST00000625075 2265 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AC012618.3-205ENST00000637896 1496 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AC010401.2-201ENST00000575137 4934 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 RNVU1-6-201ENST00000364688 164 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 IGLV2-34-201ENST00000490007 283 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AC013283.1-201ENST00000557282 492 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 RN7SL208P-201ENST00000577964 296 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AC015802.2-201ENST00000589690 189 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AL136131.3-201ENST00000607600 188 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 MIR6127-201ENST00000614019 109 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AL691477.1-201ENST00000624398 162 ntBASIC5.93□□□□□ -1.46
CHD8Q9HCK8 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC5.93□□□□□ -1.46
CHD8Q9HCK8 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 AC073065.1-201ENST00000411678 2866 ntBASIC5.92□□□□□ -1.46
CHD8Q9HCK8 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 OR13C1P-202ENST00000641378 2919 ntBASIC5.92□□□□□ -1.46
CHD8Q9HCK8 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 IGLV3-4-201ENST00000432300 244 ntBASIC5.92□□□□□ -1.46
CHD8Q9HCK8 RPS23P6-201ENST00000466136 431 ntBASIC5.92□□□□□ -1.46
CHD8Q9HCK8 RN7SL714P-201ENST00000487050 298 ntBASIC5.92□□□□□ -1.46
CHD8Q9HCK8 RN7SL547P-201ENST00000490793 290 ntBASIC5.92□□□□□ -1.46
CHD8Q9HCK8 RPL21P129-201ENST00000491732 478 ntBASIC5.92□□□□□ -1.46
CHD8Q9HCK8 AC139272.1-201ENST00000505516 640 ntBASIC5.92□□□□□ -1.46
CHD8Q9HCK8 AC131392.1-201ENST00000506490 633 ntBASIC5.92□□□□□ -1.46
CHD8Q9HCK8 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.92□□□□□ -1.46
CHD8Q9HCK8 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms