Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RN7SKP232-201ENST00000410170 290 ntBASIC6.96□□□□□ -1.3
YBX1P67809 RNU4-27P-201ENST00000410889 139 ntBASIC6.96□□□□□ -1.3
YBX1P67809 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC6.96□□□□□ -1.3
YBX1P67809 OR5M12P-201ENST00000423388 929 ntBASIC6.96□□□□□ -1.3
YBX1P67809 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.96□□□□□ -1.3
YBX1P67809 AL390023.1-201ENST00000428836 262 ntBASIC6.96□□□□□ -1.3
YBX1P67809 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.96□□□□□ -1.3
YBX1P67809 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.96□□□□□ -1.3
YBX1P67809 MTND2P21-201ENST00000436242 1042 ntBASIC6.96□□□□□ -1.3
YBX1P67809 MTCYBP39-201ENST00000437562 491 ntBASIC6.96□□□□□ -1.3
YBX1P67809 FABP5P3-201ENST00000437960 408 ntBASIC6.96□□□□□ -1.3
YBX1P67809 AC114755.4-201ENST00000439114 443 ntBASIC6.96□□□□□ -1.3
YBX1P67809 AC118469.1-201ENST00000442943 488 ntBASIC6.96□□□□□ -1.3
YBX1P67809 AL390728.3-201ENST00000452704 270 ntBASIC6.96□□□□□ -1.3
YBX1P67809 RPL31P3-201ENST00000458430 332 ntBASIC6.96□□□□□ -1.3
YBX1P67809 GYG1P1-201ENST00000460864 698 ntBASIC6.96□□□□□ -1.3
YBX1P67809 AC066616.1-201ENST00000486795 413 ntBASIC6.96□□□□□ -1.3
YBX1P67809 AC008967.1-201ENST00000504843 163 ntBASIC6.96□□□□□ -1.3
YBX1P67809 ASNSP4-201ENST00000511103 447 ntBASIC6.96□□□□□ -1.3
YBX1P67809 AC093755.1-201ENST00000512950 1023 ntBASIC6.96□□□□□ -1.3
YBX1P67809 HMGN1P17-201ENST00000513734 295 ntBASIC6.96□□□□□ -1.3
YBX1P67809 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.96□□□□□ -1.3
YBX1P67809 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.96□□□□□ -1.3
YBX1P67809 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.96□□□□□ -1.3
YBX1P67809 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.96□□□□□ -1.3
YBX1P67809 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
YBX1P67809 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC6.96□□□□□ -1.3
YBX1P67809 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
YBX1P67809 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
YBX1P67809 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.96□□□□□ -1.3
YBX1P67809 AC023080.1-201ENST00000551663 931 ntBASIC6.96□□□□□ -1.3
YBX1P67809 AC024909.2-201ENST00000553035 286 ntBASIC6.96□□□□□ -1.3
YBX1P67809 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.96□□□□□ -1.3
YBX1P67809 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.96□□□□□ -1.3
YBX1P67809 AL356801.1-201ENST00000559320 294 ntBASIC6.96□□□□□ -1.3
YBX1P67809 OR4N3P-201ENST00000559395 818 ntBASIC6.96□□□□□ -1.3
YBX1P67809 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.96□□□□□ -1.3
YBX1P67809 AC024614.1-201ENST00000577546 307 ntBASIC6.96□□□□□ -1.3
YBX1P67809 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.96□□□□□ -1.3
YBX1P67809 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.96□□□□□ -1.3
YBX1P67809 AC061975.3-201ENST00000583209 244 ntBASIC6.96□□□□□ -1.3
YBX1P67809 MIR4470-201ENST00000583453 72 ntBASIC6.96□□□□□ -1.3
YBX1P67809 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.96□□□□□ -1.3
YBX1P67809 CCDC58P3-201ENST00000590792 430 ntBASIC6.96□□□□□ -1.3
YBX1P67809 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.96□□□□□ -1.3
YBX1P67809 FAM60CP-201ENST00000591086 664 ntBASIC6.96□□□□□ -1.3
YBX1P67809 HIRAP1-201ENST00000605318 787 ntBASIC6.96□□□□□ -1.3
YBX1P67809 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.96□□□□□ -1.3
YBX1P67809 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.96□□□□□ -1.3
YBX1P67809 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
YBX1P67809 AL161931.1-201ENST00000612768 246 ntBASIC6.96□□□□□ -1.3
YBX1P67809 AL445649.1-201ENST00000615941 691 ntBASIC6.96□□□□□ -1.3
YBX1P67809 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC6.96□□□□□ -1.3
YBX1P67809 AC025016.1-201ENST00000616746 682 ntBASIC6.96□□□□□ -1.3
YBX1P67809 AL121985.2-201ENST00000621192 555 ntBASIC6.96□□□□□ -1.3
YBX1P67809 AC135068.4-201ENST00000622949 925 ntBASIC6.96□□□□□ -1.3
YBX1P67809 AP000676.3-201ENST00000623299 569 ntBASIC6.96□□□□□ -1.3
YBX1P67809 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.96□□□□□ -1.3
YBX1P67809 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.96□□□□□ -1.3
YBX1P67809 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.96□□□□□ -1.3
YBX1P67809 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.96□□□□□ -1.3
YBX1P67809 AL139254.2-202ENST00000641937 1156 ntBASIC6.96□□□□□ -1.3
YBX1P67809 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.96□□□□□ -1.3
YBX1P67809 LPAL2-203ENST00000454031 2498 ntBASIC6.96□□□□□ -1.3
YBX1P67809 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
YBX1P67809 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
YBX1P67809 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
YBX1P67809 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
YBX1P67809 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
YBX1P67809 AC095050.2-201ENST00000510748 1458 ntBASIC6.96□□□□□ -1.3
YBX1P67809 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.96□□□□□ -1.3
YBX1P67809 AC022819.1-201ENST00000563495 3910 ntBASIC6.96□□□□□ -1.3
YBX1P67809 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
YBX1P67809 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.96□□□□□ -1.3
YBX1P67809 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
YBX1P67809 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.96□□□□□ -1.3
YBX1P67809 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.96□□□□□ -1.3
YBX1P67809 HNRNPA1P54-201ENST00000411857 9714 ntBASIC6.96□□□□□ -1.3
YBX1P67809 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
YBX1P67809 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
YBX1P67809 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC6.95□□□□□ -1.3
YBX1P67809 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
YBX1P67809 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.95□□□□□ -1.3
YBX1P67809 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
YBX1P67809 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.95□□□□□ -1.3
YBX1P67809 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
YBX1P67809 RAD17P2-201ENST00000451754 1977 ntBASIC6.95□□□□□ -1.3
YBX1P67809 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
YBX1P67809 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
YBX1P67809 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.95□□□□□ -1.3
YBX1P67809 SGO1P1-201ENST00000603525 1447 ntBASIC6.95□□□□□ -1.3
YBX1P67809 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
YBX1P67809 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
YBX1P67809 ELL2P3-201ENST00000457883 1602 ntBASIC6.95□□□□□ -1.3
YBX1P67809 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
YBX1P67809 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
YBX1P67809 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
YBX1P67809 RNU6-354P-201ENST00000383862 107 ntBASIC6.95□□□□□ -1.3
YBX1P67809 RNU6-610P-201ENST00000384264 107 ntBASIC6.95□□□□□ -1.3
YBX1P67809 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms