Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HMGCS2P54868 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HMGCS2P54868 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HMGCS2P54868 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HMGCS2P54868 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGCS2P54868 NEK2P2-201ENST00000438441 1338 ntBASIC7.34□□□□□ -1.23
HMGCS2P54868 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HMGCS2P54868 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.34□□□□□ -1.23
HMGCS2P54868 SNORA17A-201ENST00000391185 133 ntBASIC7.34□□□□□ -1.23
HMGCS2P54868 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGCS2P54868 CHEK2P5-201ENST00000423877 246 ntBASIC7.34□□□□□ -1.23
HMGCS2P54868 RPL12P16-201ENST00000431098 498 ntBASIC7.34□□□□□ -1.23
HMGCS2P54868 RPL23AP19-201ENST00000436229 369 ntBASIC7.34□□□□□ -1.23
HMGCS2P54868 DNAJA1P6-201ENST00000437347 354 ntBASIC7.34□□□□□ -1.23
HMGCS2P54868 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HMGCS2P54868 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGCS2P54868 RN7SL174P-201ENST00000475578 289 ntBASIC7.34□□□□□ -1.23
HMGCS2P54868 AC093719.1-201ENST00000480427 441 ntBASIC7.34□□□□□ -1.23
HMGCS2P54868 PSMA2P2-201ENST00000504319 686 ntBASIC7.34□□□□□ -1.23
HMGCS2P54868 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HMGCS2P54868 SNORD46.2-201ENST00000516021 102 ntBASIC7.34□□□□□ -1.23
HMGCS2P54868 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGCS2P54868 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGCS2P54868 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HMGCS2P54868 AC007956.1-201ENST00000555623 542 ntBASIC7.34□□□□□ -1.23
HMGCS2P54868 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGCS2P54868 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGCS2P54868 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HMGCS2P54868 AC022106.1-201ENST00000612834 766 ntBASIC7.34□□□□□ -1.23
HMGCS2P54868 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.34□□□□□ -1.23
HMGCS2P54868 MIR6886-201ENST00000619864 61 ntBASIC7.34□□□□□ -1.23
HMGCS2P54868 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGCS2P54868 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.34□□□□□ -1.23
HMGCS2P54868 SNORA17.5-201ENST00000630429 132 ntBASIC7.34□□□□□ -1.23
HMGCS2P54868 AC008627.1-201ENST00000517511 1704 ntBASIC7.34□□□□□ -1.23
HMGCS2P54868 AF131215.2-201ENST00000531549 1710 ntBASIC7.34□□□□□ -1.23
HMGCS2P54868 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
HMGCS2P54868 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.34□□□□□ -1.23
HMGCS2P54868 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGCS2P54868 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.34□□□□□ -1.23
HMGCS2P54868 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.34□□□□□ -1.23
HMGCS2P54868 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
HMGCS2P54868 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.34□□□□□ -1.24
HMGCS2P54868 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.33□□□□□ -1.24
HMGCS2P54868 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGCS2P54868 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.33□□□□□ -1.24
HMGCS2P54868 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGCS2P54868 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGCS2P54868 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.33□□□□□ -1.24
HMGCS2P54868 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 AC127070.3-201ENST00000503695 3263 ntBASIC7.33□□□□□ -1.24
HMGCS2P54868 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
HMGCS2P54868 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 SNORA21-201ENST00000362423 132 ntBASIC7.33□□□□□ -1.24
HMGCS2P54868 RNA5SP273-201ENST00000362484 113 ntBASIC7.33□□□□□ -1.24
HMGCS2P54868 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGCS2P54868 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGCS2P54868 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.33□□□□□ -1.24
HMGCS2P54868 CDY17P-201ENST00000414121 1282 ntBASIC7.33□□□□□ -1.24
HMGCS2P54868 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.33□□□□□ -1.24
HMGCS2P54868 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.33□□□□□ -1.24
HMGCS2P54868 AL139156.3-201ENST00000454802 394 ntBASIC7.33□□□□□ -1.24
HMGCS2P54868 RN7SL705P-201ENST00000481678 294 ntBASIC7.33□□□□□ -1.24
HMGCS2P54868 PPIAP19-201ENST00000486414 492 ntBASIC7.33□□□□□ -1.24
HMGCS2P54868 RPL5P11-201ENST00000498068 893 ntBASIC7.33□□□□□ -1.24
HMGCS2P54868 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC7.33□□□□□ -1.24
HMGCS2P54868 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGCS2P54868 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.33□□□□□ -1.24
HMGCS2P54868 RNA5SP271-201ENST00000516700 88 ntBASIC7.33□□□□□ -1.24
HMGCS2P54868 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGCS2P54868 IGLV3-6-201ENST00000523937 250 ntBASIC7.33□□□□□ -1.24
HMGCS2P54868 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.33□□□□□ -1.24
HMGCS2P54868 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.33□□□□□ -1.24
HMGCS2P54868 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.33□□□□□ -1.24
HMGCS2P54868 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGCS2P54868 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.33□□□□□ -1.24
HMGCS2P54868 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
HMGCS2P54868 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.33□□□□□ -1.24
HMGCS2P54868 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.33□□□□□ -1.24
HMGCS2P54868 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.33□□□□□ -1.24
HMGCS2P54868 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HMGCS2P54868 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.33□□□□□ -1.24
HMGCS2P54868 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.33□□□□□ -1.24
HMGCS2P54868 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
HMGCS2P54868 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HMGCS2P54868 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms