Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 NEK2P2-201ENST00000438441 1338 ntBASIC5.79□□□□□ -1.48
FREM3P0C091 AC011592.1-201ENST00000624647 3634 ntBASIC5.79□□□□□ -1.48
FREM3P0C091 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
FREM3P0C091 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.79□□□□□ -1.48
FREM3P0C091 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
FREM3P0C091 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.79□□□□□ -1.48
FREM3P0C091 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.79□□□□□ -1.48
FREM3P0C091 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FREM3P0C091 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.79□□□□□ -1.48
FREM3P0C091 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.79□□□□□ -1.48
FREM3P0C091 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.79□□□□□ -1.48
FREM3P0C091 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.79□□□□□ -1.48
FREM3P0C091 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.79□□□□□ -1.48
FREM3P0C091 AC005332.4-201ENST00000592752 579 ntBASIC5.79□□□□□ -1.48
FREM3P0C091 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.79□□□□□ -1.48
FREM3P0C091 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
FREM3P0C091 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
FREM3P0C091 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FREM3P0C091 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FREM3P0C091 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
FREM3P0C091 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
FREM3P0C091 AC125238.2-201ENST00000430003 1440 ntBASIC5.79□□□□□ -1.48
FREM3P0C091 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
FREM3P0C091 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
FREM3P0C091 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
FREM3P0C091 AL136984.1-201ENST00000607611 1893 ntBASIC5.79□□□□□ -1.48
FREM3P0C091 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 RNA5SP273-201ENST00000362484 113 ntBASIC5.78□□□□□ -1.48
FREM3P0C091 RNU1-46P-201ENST00000384425 164 ntBASIC5.78□□□□□ -1.48
FREM3P0C091 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
FREM3P0C091 YWHAZP4-201ENST00000392459 708 ntBASIC5.78□□□□□ -1.48
FREM3P0C091 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.78□□□□□ -1.48
FREM3P0C091 AL451136.1-201ENST00000435399 325 ntBASIC5.78□□□□□ -1.48
FREM3P0C091 AC093166.3-201ENST00000448785 303 ntBASIC5.78□□□□□ -1.48
FREM3P0C091 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.78□□□□□ -1.48
FREM3P0C091 AC023818.1-201ENST00000498379 384 ntBASIC5.78□□□□□ -1.48
FREM3P0C091 AC091874.2-201ENST00000505889 720 ntBASIC5.78□□□□□ -1.48
FREM3P0C091 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.78□□□□□ -1.48
FREM3P0C091 MIR6085-201ENST00000618314 110 ntBASIC5.78□□□□□ -1.48
FREM3P0C091 CASC19-274ENST00000642018 970 ntBASIC5.78□□□□□ -1.48
FREM3P0C091 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
FREM3P0C091 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.78□□□□□ -1.48
FREM3P0C091 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.78□□□□□ -1.48
FREM3P0C091 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.78□□□□□ -1.48
FREM3P0C091 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.78□□□□□ -1.48
FREM3P0C091 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 CASC19-246ENST00000641625 1606 ntBASIC5.78□□□□□ -1.48
FREM3P0C091 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 QRSL1P1-201ENST00000400977 1540 ntBASIC5.78□□□□□ -1.48
FREM3P0C091 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
FREM3P0C091 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.78□□□□□ -1.48
FREM3P0C091 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
FREM3P0C091 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 PSMA6P1-201ENST00000400275 741 ntBASIC5.78□□□□□ -1.48
FREM3P0C091 PRELID1P1-201ENST00000403549 660 ntBASIC5.78□□□□□ -1.48
FREM3P0C091 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.78□□□□□ -1.48
FREM3P0C091 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC5.78□□□□□ -1.48
FREM3P0C091 RPS7P8-201ENST00000418311 581 ntBASIC5.78□□□□□ -1.48
FREM3P0C091 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.78□□□□□ -1.48
FREM3P0C091 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.78□□□□□ -1.48
FREM3P0C091 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
FREM3P0C091 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.78□□□□□ -1.48
FREM3P0C091 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.78□□□□□ -1.48
FREM3P0C091 MIR6811-201ENST00000620409 58 ntBASIC5.78□□□□□ -1.48
FREM3P0C091 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.78□□□□□ -1.48
FREM3P0C091 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC5.78□□□□□ -1.48
FREM3P0C091 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.78□□□□□ -1.48
FREM3P0C091 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.78□□□□□ -1.48
FREM3P0C091 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FREM3P0C091 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.78□□□□□ -1.48
FREM3P0C091 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
FREM3P0C091 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
FREM3P0C091 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.77□□□□□ -1.49
FREM3P0C091 OR6M2P-202ENST00000641780 2063 ntBASIC5.77□□□□□ -1.49
FREM3P0C091 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
FREM3P0C091 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
FREM3P0C091 RN7SKP189-201ENST00000365042 330 ntBASIC5.77□□□□□ -1.49
FREM3P0C091 VN1R12P-201ENST00000403778 876 ntBASIC5.77□□□□□ -1.49
FREM3P0C091 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.77□□□□□ -1.49
FREM3P0C091 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.77□□□□□ -1.49
FREM3P0C091 RN7SL104P-201ENST00000498686 293 ntBASIC5.77□□□□□ -1.49
FREM3P0C091 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.77□□□□□ -1.49
FREM3P0C091 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.77□□□□□ -1.49
FREM3P0C091 ZNF519P4-201ENST00000514008 125 ntBASIC5.77□□□□□ -1.49
FREM3P0C091 RN7SKP70-201ENST00000516655 271 ntBASIC5.77□□□□□ -1.49
FREM3P0C091 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms