Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC025262.3-201ENST00000623666 360 ntBASIC7.63□□□□□ -1.19
HLA-DOAP06340 AL118508.4-201ENST00000624142 1176 ntBASIC7.63□□□□□ -1.19
HLA-DOAP06340 AL162377.2-201ENST00000624532 337 ntBASIC7.63□□□□□ -1.19
HLA-DOAP06340 IPO5-229ENST00000631030 192 ntTSL 5 BASIC7.63□□□□□ -1.19
HLA-DOAP06340 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.63□□□□□ -1.19
HLA-DOAP06340 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-DOAP06340 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.63□□□□□ -1.19
HLA-DOAP06340 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-DOAP06340 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-DOAP06340 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.63□□□□□ -1.19
HLA-DOAP06340 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
HLA-DOAP06340 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HLA-DOAP06340 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.62□□□□□ -1.19
HLA-DOAP06340 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 CLCA3P-203ENST00000490028 2781 ntBASIC7.62□□□□□ -1.19
HLA-DOAP06340 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
HLA-DOAP06340 USP9YP3-201ENST00000434481 1766 ntBASIC7.62□□□□□ -1.19
HLA-DOAP06340 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.62□□□□□ -1.19
HLA-DOAP06340 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.62□□□□□ -1.19
HLA-DOAP06340 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.62□□□□□ -1.19
HLA-DOAP06340 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.62□□□□□ -1.19
HLA-DOAP06340 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.62□□□□□ -1.19
HLA-DOAP06340 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.62□□□□□ -1.19
HLA-DOAP06340 AC069154.1-201ENST00000432914 542 ntBASIC7.62□□□□□ -1.19
HLA-DOAP06340 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
HLA-DOAP06340 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC7.62□□□□□ -1.19
HLA-DOAP06340 RN7SL643P-201ENST00000471845 291 ntBASIC7.62□□□□□ -1.19
HLA-DOAP06340 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.62□□□□□ -1.19
HLA-DOAP06340 RNA5SP206-201ENST00000516703 121 ntBASIC7.62□□□□□ -1.19
HLA-DOAP06340 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.62□□□□□ -1.19
HLA-DOAP06340 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.62□□□□□ -1.19
HLA-DOAP06340 NDUFA5P11-201ENST00000567995 343 ntBASIC7.62□□□□□ -1.19
HLA-DOAP06340 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.62□□□□□ -1.19
HLA-DOAP06340 AC124916.2-201ENST00000604416 224 ntBASIC7.62□□□□□ -1.19
HLA-DOAP06340 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.62□□□□□ -1.19
HLA-DOAP06340 AC106730.3-201ENST00000624568 641 ntBASIC7.62□□□□□ -1.19
HLA-DOAP06340 MIR1910-201ENST00000636955 80 ntBASIC7.62□□□□□ -1.19
HLA-DOAP06340 AC009452.1-201ENST00000640823 606 ntBASIC7.62□□□□□ -1.19
HLA-DOAP06340 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 AC062022.1-201ENST00000451026 1684 ntBASIC7.62□□□□□ -1.19
HLA-DOAP06340 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HLA-DOAP06340 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-DOAP06340 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-DOAP06340 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-DOAP06340 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-DOAP06340 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-DOAP06340 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-DOAP06340 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-DOAP06340 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-DOAP06340 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-DOAP06340 RNU6-167P-201ENST00000384292 106 ntBASIC7.61□□□□□ -1.19
HLA-DOAP06340 AL157702.1-201ENST00000398764 426 ntBASIC7.61□□□□□ -1.19
HLA-DOAP06340 RN7SKP240-201ENST00000410583 375 ntBASIC7.61□□□□□ -1.19
HLA-DOAP06340 AL713922.1-201ENST00000416477 747 ntBASIC7.61□□□□□ -1.19
HLA-DOAP06340 AC244453.4-201ENST00000419150 388 ntBASIC7.61□□□□□ -1.19
HLA-DOAP06340 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.61□□□□□ -1.19
HLA-DOAP06340 RPSAP65-201ENST00000429660 595 ntBASIC7.61□□□□□ -1.19
HLA-DOAP06340 RPL12P11-201ENST00000439970 501 ntBASIC7.61□□□□□ -1.19
HLA-DOAP06340 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 RPS10P18-201ENST00000442662 495 ntBASIC7.61□□□□□ -1.19
HLA-DOAP06340 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 AC106800.2-201ENST00000514009 1103 ntBASIC7.61□□□□□ -1.19
HLA-DOAP06340 IGHV4-55-201ENST00000520889 368 ntBASIC7.61□□□□□ -1.19
HLA-DOAP06340 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-DOAP06340 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 DYNLL1P1-201ENST00000595442 269 ntBASIC7.61□□□□□ -1.19
HLA-DOAP06340 AL953862.2-201ENST00000603089 820 ntBASIC7.61□□□□□ -1.19
HLA-DOAP06340 AL161912.3-201ENST00000605404 628 ntBASIC7.61□□□□□ -1.19
HLA-DOAP06340 MIR6861-201ENST00000618657 64 ntBASIC7.61□□□□□ -1.19
HLA-DOAP06340 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-DOAP06340 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-DOAP06340 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HLA-DOAP06340 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.61□□□□□ -1.19
HLA-DOAP06340 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms