Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SPTA1P02549 CDY8P-201ENST00000428380 1279 ntBASIC5.9□□□□□ -1.46
SPTA1P02549 AL590004.3-202ENST00000445883 451 ntBASIC5.9□□□□□ -1.46
SPTA1P02549 CDY20P-201ENST00000447528 1279 ntBASIC5.9□□□□□ -1.46
SPTA1P02549 AL133351.3-201ENST00000454998 193 ntBASIC5.9□□□□□ -1.46
SPTA1P02549 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SPTA1P02549 OR51K1P-201ENST00000510214 950 ntBASIC5.9□□□□□ -1.46
SPTA1P02549 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC5.9□□□□□ -1.46
SPTA1P02549 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.9□□□□□ -1.46
SPTA1P02549 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.9□□□□□ -1.46
SPTA1P02549 AP005136.2-201ENST00000583253 1049 ntBASIC5.9□□□□□ -1.46
SPTA1P02549 AC037198.3-201ENST00000616754 526 ntBASIC5.9□□□□□ -1.46
SPTA1P02549 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
SPTA1P02549 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SPTA1P02549 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SPTA1P02549 C4BPAP1-201ENST00000415474 1893 ntBASIC5.9□□□□□ -1.46
SPTA1P02549 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SPTA1P02549 MELK-211ENST00000545008 2236 ntTSL 2 BASIC5.9□□□□□ -1.46
SPTA1P02549 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SPTA1P02549 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SPTA1P02549 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SPTA1P02549 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.9□□□□□ -1.46
SPTA1P02549 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
SPTA1P02549 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SPTA1P02549 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SPTA1P02549 RNA5SP172-201ENST00000365061 118 ntBASIC5.9□□□□□ -1.47
SPTA1P02549 AL590763.1-201ENST00000398297 1545 ntBASIC5.9□□□□□ -1.47
SPTA1P02549 AC073065.1-201ENST00000411678 2866 ntBASIC5.9□□□□□ -1.47
SPTA1P02549 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.9□□□□□ -1.47
SPTA1P02549 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC5.9□□□□□ -1.47
SPTA1P02549 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SPTA1P02549 AL359263.1-201ENST00000441188 2796 ntBASIC5.9□□□□□ -1.47
SPTA1P02549 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.9□□□□□ -1.47
SPTA1P02549 RPS14P8-201ENST00000478778 369 ntBASIC5.9□□□□□ -1.47
SPTA1P02549 RPL19P11-201ENST00000495944 589 ntBASIC5.9□□□□□ -1.47
SPTA1P02549 OR4A1P-201ENST00000532342 920 ntBASIC5.9□□□□□ -1.47
SPTA1P02549 AC007956.1-201ENST00000555623 542 ntBASIC5.9□□□□□ -1.47
SPTA1P02549 TPRX1P1-201ENST00000557620 319 ntBASIC5.9□□□□□ -1.47
SPTA1P02549 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5.9□□□□□ -1.47
SPTA1P02549 AC106785.4-201ENST00000569492 412 ntBASIC5.9□□□□□ -1.47
SPTA1P02549 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.9□□□□□ -1.47
SPTA1P02549 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.9□□□□□ -1.47
SPTA1P02549 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SPTA1P02549 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SPTA1P02549 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
SPTA1P02549 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SPTA1P02549 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SPTA1P02549 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC5.9□□□□□ -1.47
SPTA1P02549 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SPTA1P02549 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SPTA1P02549 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SPTA1P02549 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.89□□□□□ -1.47
SPTA1P02549 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SPTA1P02549 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC5.89□□□□□ -1.47
SPTA1P02549 AL133270.1-201ENST00000402635 279 ntBASIC5.89□□□□□ -1.47
SPTA1P02549 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.89□□□□□ -1.47
SPTA1P02549 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SPTA1P02549 TNPO1P1-201ENST00000423641 1138 ntBASIC5.89□□□□□ -1.47
SPTA1P02549 RPL7AP14-201ENST00000424041 802 ntBASIC5.89□□□□□ -1.47
SPTA1P02549 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.89□□□□□ -1.47
SPTA1P02549 AC023194.2-201ENST00000465398 406 ntBASIC5.89□□□□□ -1.47
SPTA1P02549 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC5.89□□□□□ -1.47
SPTA1P02549 Y_RNA.667-201ENST00000516212 107 ntBASIC5.89□□□□□ -1.47
SPTA1P02549 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.89□□□□□ -1.47
SPTA1P02549 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.89□□□□□ -1.47
SPTA1P02549 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.89□□□□□ -1.47
SPTA1P02549 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.89□□□□□ -1.47
SPTA1P02549 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC5.89□□□□□ -1.47
SPTA1P02549 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.89□□□□□ -1.47
SPTA1P02549 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC5.89□□□□□ -1.47
SPTA1P02549 AL353807.3-201ENST00000500626 2505 ntBASIC5.89□□□□□ -1.47
SPTA1P02549 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SPTA1P02549 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SPTA1P02549 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SPTA1P02549 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SPTA1P02549 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SPTA1P02549 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC5.89□□□□□ -1.47
SPTA1P02549 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SPTA1P02549 AL162171.3-201ENST00000617439 3178 ntBASIC5.89□□□□□ -1.47
SPTA1P02549 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC5.89□□□□□ -1.47
SPTA1P02549 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SPTA1P02549 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SPTA1P02549 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC5.89□□□□□ -1.47
SPTA1P02549 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SPTA1P02549 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
SPTA1P02549 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.89□□□□□ -1.47
SPTA1P02549 AC006213.6-201ENST00000623722 4179 ntBASIC5.89□□□□□ -1.47
SPTA1P02549 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC5.89□□□□□ -1.47
SPTA1P02549 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.89□□□□□ -1.47
SPTA1P02549 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.89□□□□□ -1.47
SPTA1P02549 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.89□□□□□ -1.47
SPTA1P02549 HMGN1P6-201ENST00000438508 291 ntBASIC5.89□□□□□ -1.47
SPTA1P02549 ATP5LP2-201ENST00000440646 311 ntBASIC5.89□□□□□ -1.47
SPTA1P02549 PPIAP7-201ENST00000454070 489 ntBASIC5.89□□□□□ -1.47
SPTA1P02549 AC093270.2-201ENST00000486157 792 ntBASIC5.89□□□□□ -1.47
SPTA1P02549 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SPTA1P02549 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
SPTA1P02549 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.89□□□□□ -1.47
SPTA1P02549 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SPTA1P02549 AP000620.1-201ENST00000527147 504 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms