Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.99□□□□□ -1.45
SSX4O60224 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
SSX4O60224 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SSX4O60224 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SSX4O60224 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.99□□□□□ -1.45
SSX4O60224 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.99□□□□□ -1.45
SSX4O60224 LINC01616-201ENST00000561816 2280 ntBASIC5.99□□□□□ -1.45
SSX4O60224 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX4O60224 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SSX4O60224 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSX4O60224 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSX4O60224 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
SSX4O60224 RNF19BPY-201ENST00000458209 1550 ntBASIC5.98□□□□□ -1.45
SSX4O60224 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX4O60224 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
SSX4O60224 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX4O60224 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSX4O60224 CASC19-255ENST00000641733 1385 ntBASIC5.98□□□□□ -1.45
SSX4O60224 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSX4O60224 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX4O60224 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX4O60224 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX4O60224 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX4O60224 RPL24P2-201ENST00000421023 475 ntBASIC5.98□□□□□ -1.45
SSX4O60224 AC007568.1-201ENST00000422912 471 ntBASIC5.98□□□□□ -1.45
SSX4O60224 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.98□□□□□ -1.45
SSX4O60224 LDHAP2-201ENST00000437325 985 ntBASIC5.98□□□□□ -1.45
SSX4O60224 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.98□□□□□ -1.45
SSX4O60224 BX679664.2-201ENST00000439282 283 ntBASIC5.98□□□□□ -1.45
SSX4O60224 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX4O60224 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX4O60224 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX4O60224 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX4O60224 AL451063.1-201ENST00000450164 1133 ntBASIC5.98□□□□□ -1.45
SSX4O60224 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX4O60224 RNU7-157P-201ENST00000459600 66 ntBASIC5.98□□□□□ -1.45
SSX4O60224 RPL5P33-201ENST00000487833 905 ntBASIC5.98□□□□□ -1.45
SSX4O60224 RN7SL104P-201ENST00000498686 293 ntBASIC5.98□□□□□ -1.45
SSX4O60224 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX4O60224 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.98□□□□□ -1.45
SSX4O60224 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX4O60224 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX4O60224 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.98□□□□□ -1.45
SSX4O60224 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.98□□□□□ -1.45
SSX4O60224 IGKV2D-38-201ENST00000518423 240 ntBASIC5.98□□□□□ -1.45
SSX4O60224 EEF1B2P2-201ENST00000519625 676 ntBASIC5.98□□□□□ -1.45
SSX4O60224 AC130364.2-201ENST00000528639 604 ntBASIC5.98□□□□□ -1.45
SSX4O60224 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX4O60224 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.98□□□□□ -1.45
SSX4O60224 AC079866.1-201ENST00000534985 1220 ntBASIC5.98□□□□□ -1.45
SSX4O60224 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX4O60224 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.98□□□□□ -1.45
SSX4O60224 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.98□□□□□ -1.45
SSX4O60224 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.98□□□□□ -1.45
SSX4O60224 DPPA3P2-202ENST00000557188 1219 ntBASIC5.98□□□□□ -1.45
SSX4O60224 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX4O60224 AC092944.2-201ENST00000605443 889 ntBASIC5.98□□□□□ -1.45
SSX4O60224 AC009779.8-202ENST00000607990 932 ntBASIC5.98□□□□□ -1.45
SSX4O60224 AC015819.1-201ENST00000613588 663 ntBASIC5.98□□□□□ -1.45
SSX4O60224 MIR6849-201ENST00000618543 69 ntBASIC5.98□□□□□ -1.45
SSX4O60224 MRPL57P3-201ENST00000619218 176 ntBASIC5.98□□□□□ -1.45
SSX4O60224 MTCO1P1-201ENST00000624263 1081 ntBASIC5.98□□□□□ -1.45
SSX4O60224 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.98□□□□□ -1.45
SSX4O60224 AL139254.2-202ENST00000641937 1156 ntBASIC5.98□□□□□ -1.45
SSX4O60224 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.98□□□□□ -1.45
SSX4O60224 AC087516.1-201ENST00000561236 2428 ntBASIC5.98□□□□□ -1.45
SSX4O60224 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SSX4O60224 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
SSX4O60224 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
SSX4O60224 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSX4O60224 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSX4O60224 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SSX4O60224 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX4O60224 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX4O60224 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX4O60224 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSX4O60224 AC006213.6-201ENST00000623722 4179 ntBASIC5.97□□□□□ -1.45
SSX4O60224 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SSX4O60224 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX4O60224 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX4O60224 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX4O60224 MAPK10-379ENST00000642013 1385 ntBASIC5.97□□□□□ -1.45
SSX4O60224 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX4O60224 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX4O60224 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SSX4O60224 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSX4O60224 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.97□□□□□ -1.45
SSX4O60224 OR56A4-201ENST00000330728 1209 ntBASIC5.97□□□□□ -1.45
SSX4O60224 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC5.97□□□□□ -1.45
SSX4O60224 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX4O60224 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSX4O60224 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.97□□□□□ -1.45
SSX4O60224 RN7SKP146-201ENST00000410242 334 ntBASIC5.97□□□□□ -1.45
SSX4O60224 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.97□□□□□ -1.45
SSX4O60224 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX4O60224 AC007365.2-201ENST00000428806 458 ntBASIC5.97□□□□□ -1.45
SSX4O60224 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.97□□□□□ -1.45
SSX4O60224 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SSX4O60224 PCNPP2-201ENST00000441651 455 ntBASIC5.97□□□□□ -1.45
SSX4O60224 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms