Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MIR5095-201ENST00000578844 88 ntBASIC8.01□□□□□ -1.13
SCN11AQ9UI33 AP005119.1-201ENST00000580956 292 ntBASIC8.01□□□□□ -1.13
SCN11AQ9UI33 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 UGT2B27P-201ENST00000505092 1620 ntBASIC8.01□□□□□ -1.13
SCN11AQ9UI33 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 AC011416.1-201ENST00000514947 1732 ntBASIC8.01□□□□□ -1.13
SCN11AQ9UI33 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SCN11AQ9UI33 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8□□□□□ -1.13
SCN11AQ9UI33 GNL2P1-201ENST00000451274 2190 ntBASIC8□□□□□ -1.13
SCN11AQ9UI33 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
SCN11AQ9UI33 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC8□□□□□ -1.13
SCN11AQ9UI33 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC8□□□□□ -1.13
SCN11AQ9UI33 KIF4CP-201ENST00000422742 1279 ntBASIC8□□□□□ -1.13
SCN11AQ9UI33 AC245884.2-201ENST00000426257 404 ntBASIC8□□□□□ -1.13
SCN11AQ9UI33 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC8□□□□□ -1.13
SCN11AQ9UI33 RPL31P15-201ENST00000449770 338 ntBASIC8□□□□□ -1.13
SCN11AQ9UI33 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC8□□□□□ -1.13
SCN11AQ9UI33 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC8□□□□□ -1.13
SCN11AQ9UI33 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC8□□□□□ -1.13
SCN11AQ9UI33 AC090022.1-201ENST00000546569 311 ntBASIC8□□□□□ -1.13
SCN11AQ9UI33 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC8□□□□□ -1.13
SCN11AQ9UI33 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC8□□□□□ -1.13
SCN11AQ9UI33 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC8□□□□□ -1.13
SCN11AQ9UI33 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
SCN11AQ9UI33 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC8□□□□□ -1.13
SCN11AQ9UI33 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SCN11AQ9UI33 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 AL445466.1-201ENST00000448432 357 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 AC016027.4-201ENST00000450866 277 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 SNX18P26-201ENST00000458433 740 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 SETP21-201ENST00000514799 892 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 AC013731.1-201ENST00000604340 883 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 AL645933.2-201ENST00000606743 1207 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 AC006924.1-201ENST00000610750 559 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 HDAC1P2-201ENST00000453661 1398 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 AC012254.3-201ENST00000591183 2117 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 RN7SKP69-201ENST00000365390 305 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 MIR640-201ENST00000385086 96 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 NMD3P2-201ENST00000421815 761 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 AC009237.1-201ENST00000442127 744 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 AP006222.1-205ENST00000450734 457 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 RNA5SP362-201ENST00000516048 118 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 RNA5SP271-201ENST00000516700 88 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 RPL12P48-201ENST00000605620 304 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 AC096861.1-201ENST00000616652 240 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 AL357562.1-201ENST00000624911 609 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 AP002370.1-201ENST00000528055 1602 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
SCN11AQ9UI33 GUCY1B2-204ENST00000531898 1979 ntBASIC7.99□□□□□ -1.13
SCN11AQ9UI33 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
SCN11AQ9UI33 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms