Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MATN2-208ENST00000520016 3495 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 ARHGAP42P5-201ENST00000548856 2936 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 BRDT-203ENST00000370389 3696 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 ZNF833P-202ENST00000635221 1540 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 ZNF415-202ENST00000421033 2402 ntAPPRIS P3 TSL 4 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 THAP9-AS1-204ENST00000504792 2577 ntTSL 2 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 SIDT2-219ENST00000620360 3924 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 SOCS4-202ENST00000395472 6779 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 TTTY6-201ENST00000253838 491 ntTSL 2 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 TTTY6B-201ENST00000253848 491 ntTSL 3 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 CNTNAP4-202ENST00000377504 4723 ntTSL 5 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 Y_RNA.481-201ENST00000384373 102 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 SNORA51.12-201ENST00000384448 134 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 MT-TR-201ENST00000387439 65 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 KRTAP9-1-201ENST00000398470 753 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 RN7SKP58-201ENST00000411010 305 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 KCNIP1-204ENST00000411494 684 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 AC211486.3-201ENST00000412694 621 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 AC073342.1-201ENST00000427392 592 ntTSL 5 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 SKP1P3-201ENST00000429280 487 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 MTCO3P21-201ENST00000430791 643 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 AC009961.2-201ENST00000435771 251 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 AC079448.1-201ENST00000449377 373 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 FGF7P3-201ENST00000454645 303 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 AC010878.1-201ENST00000456500 1047 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 AC091564.1-201ENST00000464563 479 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 RUFY3-204ENST00000502653 2342 ntTSL 2 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 MTND4LP22-201ENST00000508209 276 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 AC027698.1-201ENST00000518536 625 ntTSL 3 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 MBP-228ENST00000527041 582 ntTSL 5 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 PROSER3-207ENST00000537459 772 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 LMO3-222ENST00000540445 906 ntTSL 2 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 AC007221.1-201ENST00000570038 796 ntTSL 5 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 PRR13P4-201ENST00000577786 421 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 AC090948.2-201ENST00000607363 564 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 Metazoa_SRP.74-201ENST00000614973 284 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 AL132822.1-201ENST00000617063 513 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 Metazoa_SRP.126-201ENST00000618354 266 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 Metazoa_SRP.175-201ENST00000619837 250 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 MIR6834-201ENST00000622807 81 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 LINC01320-209ENST00000625995 928 ntTSL 5 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 TEX41-265ENST00000627785 704 ntTSL 5 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 KRTAP9-1-202ENST00000634235 351 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 DRAIC-201ENST00000498938 1345 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 OR5BR1P-201ENST00000524992 1330 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC7.99□□□□□ -1.13
USB1Q9BQ65 AC010533.1-201ENST00000624875 2105 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
USB1Q9BQ65 AP000542.3-201ENST00000623391 6114 ntBASIC7.99□□□□□ -1.13
USB1Q9BQ65 AL451064.2-201ENST00000623514 1654 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC110926.1-201ENST00000412499 2825 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 HACL1-208ENST00000456194 1880 ntTSL 2 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 ZNF239-201ENST00000306006 2389 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 PHLDB2-207ENST00000477695 5813 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC007823.1-201ENST00000569932 1566 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 PART1-202ENST00000506884 2068 ntTSL 2 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 GOSR2-234ENST00000640138 3408 ntTSL 5 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 ZNF233-201ENST00000391958 2784 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC009948.3-201ENST00000603415 1798 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms