Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
SIN3AQ96ST3 AL139158.1-201ENST00000424719 340 ntBASIC9.13□□□□□ -0.95
SIN3AQ96ST3 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SIN3AQ96ST3 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
SIN3AQ96ST3 AL590004.3-202ENST00000445883 451 ntBASIC9.13□□□□□ -0.95
SIN3AQ96ST3 CT45A11P-201ENST00000448043 1134 ntBASIC9.13□□□□□ -0.95
SIN3AQ96ST3 VN1R38P-201ENST00000450265 887 ntBASIC9.13□□□□□ -0.95
SIN3AQ96ST3 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC9.13□□□□□ -0.95
SIN3AQ96ST3 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC9.13□□□□□ -0.95
SIN3AQ96ST3 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC9.13□□□□□ -0.95
SIN3AQ96ST3 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC9.13□□□□□ -0.95
SIN3AQ96ST3 AP001858.2-201ENST00000536213 601 ntBASIC9.13□□□□□ -0.95
SIN3AQ96ST3 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC9.13□□□□□ -0.95
SIN3AQ96ST3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC9.13□□□□□ -0.95
SIN3AQ96ST3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
SIN3AQ96ST3 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SIN3AQ96ST3 AKAP17BP-201ENST00000431706 2719 ntBASIC9.13□□□□□ -0.95
SIN3AQ96ST3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC9.13□□□□□ -0.95
SIN3AQ96ST3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SIN3AQ96ST3 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 AC098614.1-202ENST00000634895 1830 ntBASIC9.12□□□□□ -0.95
SIN3AQ96ST3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 AC092724.1-201ENST00000624623 3397 ntBASIC9.12□□□□□ -0.95
SIN3AQ96ST3 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 CR1-204ENST00000367052 7469 ntTSL 5 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 CR1-205ENST00000367053 7469 ntTSL 5 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 MIR188-201ENST00000385034 86 ntBASIC9.12□□□□□ -0.95
SIN3AQ96ST3 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 VPS25P1-201ENST00000455691 508 ntBASIC9.12□□□□□ -0.95
SIN3AQ96ST3 RPL34P33-201ENST00000486062 334 ntBASIC9.12□□□□□ -0.95
SIN3AQ96ST3 AC023818.1-201ENST00000498379 384 ntBASIC9.12□□□□□ -0.95
SIN3AQ96ST3 AC018797.1-201ENST00000510791 255 ntBASIC9.12□□□□□ -0.95
SIN3AQ96ST3 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 AC091193.1-201ENST00000604640 448 ntBASIC9.12□□□□□ -0.95
SIN3AQ96ST3 AC009779.8-202ENST00000607990 932 ntBASIC9.12□□□□□ -0.95
SIN3AQ96ST3 AC006924.1-201ENST00000610750 559 ntBASIC9.12□□□□□ -0.95
SIN3AQ96ST3 AL080312.2-201ENST00000613001 630 ntBASIC9.12□□□□□ -0.95
SIN3AQ96ST3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 OR7A1P-202ENST00000641542 1158 ntBASIC9.12□□□□□ -0.95
SIN3AQ96ST3 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 OFD1P15Y-201ENST00000411536 1392 ntBASIC9.12□□□□□ -0.95
SIN3AQ96ST3 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
SIN3AQ96ST3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 MIR1275-201ENST00000408770 80 ntBASIC9.11□□□□□ -0.95
SIN3AQ96ST3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 AC073594.1-201ENST00000462065 364 ntBASIC9.11□□□□□ -0.95
SIN3AQ96ST3 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 AC005017.1-201ENST00000482002 490 ntBASIC9.11□□□□□ -0.95
SIN3AQ96ST3 AK6-203ENST00000502819 743 ntTSL 5 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 AC095052.1-201ENST00000509955 863 ntBASIC9.11□□□□□ -0.95
SIN3AQ96ST3 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 AL078601.3-201ENST00000573303 535 ntBASIC9.11□□□□□ -0.95
SIN3AQ96ST3 AC010998.3-201ENST00000613871 631 ntBASIC9.11□□□□□ -0.95
SIN3AQ96ST3 uc_338.31-201ENST00000615595 186 ntBASIC9.11□□□□□ -0.95
SIN3AQ96ST3 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 MIR7159-201ENST00000620587 66 ntBASIC9.11□□□□□ -0.95
SIN3AQ96ST3 AL596275.2-207ENST00000641188 675 ntBASIC9.11□□□□□ -0.95
SIN3AQ96ST3 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
SIN3AQ96ST3 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms