Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AL645927.1-201ENST00000396783 406 ntBASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AC018809.2-201ENST00000602436 3823 ntBASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AC005831.1-201ENST00000624384 1697 ntBASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 FTX-215ENST00000638681 9771 ntTSL 5 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AC103591.2-201ENST00000265259 766 ntBASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 TRIM60P16-201ENST00000444048 694 ntBASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AC073850.1-201ENST00000449243 255 ntBASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AL122020.1-201ENST00000472287 459 ntBASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 RPL5P5-201ENST00000392009 893 ntBASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 WDR95P-201ENST00000425638 1542 ntBASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 RPL5P9-201ENST00000448118 886 ntBASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AC025470.1-201ENST00000510053 2032 ntBASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 ELOCP28-201ENST00000590044 317 ntBASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 TRAK2-201ENST00000332624 6510 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 SCRN1-201ENST00000242059 5257 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 SNORA43.1-201ENST00000364863 140 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AL445238.1-204ENST00000400311 463 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AC096537.2-201ENST00000413707 714 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 RPL7AP6-201ENST00000477943 801 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 NENFP3-201ENST00000503735 313 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 SSX8-201ENST00000506270 579 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AC110775.1-201ENST00000513721 462 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AC010333.3-201ENST00000615100 402 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 UVSSA-201ENST00000324803 4441 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 SLC24A4-201ENST00000393265 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AC012254.3-201ENST00000591183 2117 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 RNU1-106P-201ENST00000384382 164 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 OR5M14P-201ENST00000506803 618 ntBASIC4.2□□□□□ -1.74
ALMS1Q8TCU4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms