Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC7.23□□□□□ -1.25
CTSBP07858 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CTSBP07858 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CTSBP07858 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CTSBP07858 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CTSBP07858 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC7.23□□□□□ -1.25
CTSBP07858 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.23□□□□□ -1.25
CTSBP07858 GTF2IP1-202ENST00000614592 2047 ntBASIC7.23□□□□□ -1.25
CTSBP07858 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
CTSBP07858 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CTSBP07858 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CTSBP07858 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CTSBP07858 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CTSBP07858 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
CTSBP07858 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CTSBP07858 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CTSBP07858 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CTSBP07858 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC7.23□□□□□ -1.25
CTSBP07858 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CTSBP07858 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC7.23□□□□□ -1.25
CTSBP07858 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC7.22□□□□□ -1.25
CTSBP07858 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC7.22□□□□□ -1.25
CTSBP07858 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CTSBP07858 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 AC008937.3-201ENST00000606813 1700 ntBASIC7.22□□□□□ -1.25
CTSBP07858 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC7.22□□□□□ -1.25
CTSBP07858 RNU6-1119P-201ENST00000384349 108 ntBASIC7.22□□□□□ -1.25
CTSBP07858 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CTSBP07858 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CTSBP07858 SNORA26.8-201ENST00000391306 124 ntBASIC7.22□□□□□ -1.25
CTSBP07858 NUS1P4-201ENST00000401550 585 ntBASIC7.22□□□□□ -1.25
CTSBP07858 PGBD4P8-201ENST00000412993 562 ntBASIC7.22□□□□□ -1.25
CTSBP07858 BTF3P9-201ENST00000418784 283 ntBASIC7.22□□□□□ -1.25
CTSBP07858 VN1R35P-201ENST00000428102 693 ntBASIC7.22□□□□□ -1.25
CTSBP07858 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.22□□□□□ -1.25
CTSBP07858 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC7.22□□□□□ -1.25
CTSBP07858 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC7.22□□□□□ -1.25
CTSBP07858 AL929410.2-201ENST00000451170 189 ntBASIC7.22□□□□□ -1.25
CTSBP07858 RPL5P32-201ENST00000454085 879 ntBASIC7.22□□□□□ -1.25
CTSBP07858 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 AC013429.1-201ENST00000456604 422 ntBASIC7.22□□□□□ -1.25
CTSBP07858 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.22□□□□□ -1.25
CTSBP07858 RN7SL55P-201ENST00000464534 297 ntBASIC7.22□□□□□ -1.25
CTSBP07858 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 AC113430.1-201ENST00000506872 718 ntBASIC7.22□□□□□ -1.25
CTSBP07858 AC079140.3-201ENST00000511111 550 ntBASIC7.22□□□□□ -1.25
CTSBP07858 EIF3KP1-201ENST00000513279 656 ntBASIC7.22□□□□□ -1.25
CTSBP07858 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC7.22□□□□□ -1.25
CTSBP07858 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC7.22□□□□□ -1.25
CTSBP07858 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
CTSBP07858 UBE2NP1-201ENST00000545592 458 ntBASIC7.22□□□□□ -1.25
CTSBP07858 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.22□□□□□ -1.25
CTSBP07858 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC7.22□□□□□ -1.25
CTSBP07858 AADACP1-206ENST00000561502 1193 ntBASIC7.22□□□□□ -1.25
CTSBP07858 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.22□□□□□ -1.25
CTSBP07858 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC7.22□□□□□ -1.25
CTSBP07858 AC024451.4-201ENST00000602578 752 ntBASIC7.22□□□□□ -1.25
CTSBP07858 AL031429.2-201ENST00000602605 649 ntBASIC7.22□□□□□ -1.25
CTSBP07858 ANKRD20A19P-203ENST00000602724 295 ntBASIC7.22□□□□□ -1.25
CTSBP07858 AC009237.12-201ENST00000604755 742 ntBASIC7.22□□□□□ -1.25
CTSBP07858 AC016769.4-201ENST00000616893 535 ntBASIC7.22□□□□□ -1.25
CTSBP07858 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC7.22□□□□□ -1.25
CTSBP07858 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 LINC00954-202ENST00000449086 2995 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC7.22□□□□□ -1.25
CTSBP07858 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.22□□□□□ -1.25
CTSBP07858 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CTSBP07858 AC006141.1-201ENST00000581917 2170 ntBASIC7.22□□□□□ -1.25
CTSBP07858 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC7.22□□□□□ -1.25
CTSBP07858 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 AC069222.1-201ENST00000608028 3360 ntBASIC7.22□□□□□ -1.25
CTSBP07858 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.22□□□□□ -1.25
CTSBP07858 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CTSBP07858 VEZF1P1-201ENST00000423931 1541 ntBASIC7.22□□□□□ -1.25
CTSBP07858 MTCO1P28-201ENST00000574177 1528 ntBASIC7.22□□□□□ -1.25
CTSBP07858 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC7.21□□□□□ -1.25
CTSBP07858 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CTSBP07858 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CTSBP07858 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
CTSBP07858 NEPNP-201ENST00000404786 1371 ntBASIC7.21□□□□□ -1.25
CTSBP07858 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
CTSBP07858 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
CTSBP07858 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
CTSBP07858 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms