Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 RN7SKP257-201ENST00000364525 309 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 SETP22-201ENST00000412243 957 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AL929472.1-201ENST00000417484 429 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 PTPN2P1-201ENST00000423212 1072 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 NPM1P25-201ENST00000429734 854 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AK3P5-201ENST00000432033 519 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 UBBP5-201ENST00000446970 266 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AC099340.1-201ENST00000475247 599 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 CR383656.1-201ENST00000484916 377 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 PVT1-214ENST00000522875 922 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AP002004.1-206ENST00000532441 876 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AL162632.2-201ENST00000553933 399 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AL049840.5-201ENST00000602827 552 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AC093635.1-201ENST00000609028 555 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AC091059.2-201ENST00000623355 614 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AC018692.2-201ENST00000624130 348 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 CASC19-228ENST00000641414 1684 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 EEF1A1P12-201ENST00000443590 1346 ntBASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HLA-DRB4X5D2U9 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 RBPJP6-201ENST00000411556 1431 ntBASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 VTRNA3-1P-201ENST00000362552 102 ntBASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 SNORD8-201ENST00000363915 110 ntBASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 ATP6V1G1P4-201ENST00000438388 335 ntBASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 RPL23AP68-201ENST00000480924 445 ntBASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 AC114728.1-201ENST00000488289 483 ntBASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 RN7SL350P-201ENST00000492591 299 ntBASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 AC093815.1-201ENST00000508637 280 ntBASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 AC139713.1-202ENST00000512366 460 ntBASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 MINOS1P4-201ENST00000515470 318 ntBASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC4.91□□□□□ -1.62
HLA-DRB4X5D2U9 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms