Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL731556.1-201ENST00000394628 3711 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 OR5M2P-202ENST00000641241 4242 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 CASC19-246ENST00000641625 1606 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 BRAFP1-201ENST00000445336 2703 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 OR2M1P-201ENST00000318104 951 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AL360013.1-201ENST00000419031 858 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AL389925.1-201ENST00000432257 728 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC094019.1-201ENST00000434678 472 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC002553.3-201ENST00000453002 341 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC016724.1-201ENST00000453215 421 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 OR6M2P-201ENST00000529831 871 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC079905.1-201ENST00000549280 475 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AL080312.2-201ENST00000613001 630 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC012254.5-201ENST00000623573 478 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 LINC02495-203ENST00000636704 242 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC005034.3-201ENST00000604845 1747 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AKAP17BP-201ENST00000431706 2719 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 QRSL1P1-201ENST00000400977 1540 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 TMCC1P1-201ENST00000518897 1980 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC003989.1-201ENST00000434569 565 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC011742.2-201ENST00000443818 352 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 VN1R38P-201ENST00000450265 887 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 RANP2-201ENST00000456833 229 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 MAST4-IT1-201ENST00000514241 658 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 RN7SL230P-201ENST00000580835 303 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC027229.1-201ENST00000583887 253 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AL589863.1-201ENST00000595383 631 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC091167.5-201ENST00000605689 894 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 MIR6085-201ENST00000618314 110 ntBASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
KIAA1549Q9HCM3 LINC02035-201ENST00000610128 5476 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 AL031651.1-201ENST00000615357 1438 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 VN2R1P-201ENST00000449668 1743 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 RBBP4P5-201ENST00000398583 1266 ntBASIC5.72□□□□□ -1.49
KIAA1549Q9HCM3 LYPLA1P3-201ENST00000402650 695 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms