Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MTND3P7-201ENST00000474435 343 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 RPL5P15-201ENST00000475870 897 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 TPT1P3-201ENST00000492841 512 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 PCNAP1-201ENST00000505363 709 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 SNX18P25-201ENST00000510539 758 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC068631.3-201ENST00000538831 225 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 SETP1-201ENST00000556014 845 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AL132640.2-202ENST00000559732 614 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 EIF4EBP2P2-201ENST00000563883 333 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 RN7SL835P-201ENST00000579920 262 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC091135.1-201ENST00000585943 307 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 VN1R88P-201ENST00000596787 292 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AL035417.2-201ENST00000603887 796 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 DPRXP5-201ENST00000604662 539 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC124312.4-201ENST00000605533 310 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 U47924.1-201ENST00000606539 434 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AL365181.4-201ENST00000609800 547 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC080112.3-201ENST00000612552 880 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 VN1R74P-201ENST00000613259 503 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC025588.4-201ENST00000615802 908 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 pRNA.9-201ENST00000618609 89 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 SNORA43.5-201ENST00000631270 138 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 YES1P1-201ENST00000418510 1628 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 DDX18P5-201ENST00000534547 1306 ntBASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSBP3Q9BWW4 AC133552.3-201ENST00000572236 1869 ntBASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 EEF1A1P22-201ENST00000559385 1380 ntBASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 PWRN1-212ENST00000569908 1435 ntBASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 RNA5SP396-201ENST00000364834 120 ntBASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 RNU1-122P-201ENST00000365538 156 ntBASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 SSX6-201ENST00000376932 562 ntBASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 RNU6-207P-201ENST00000384137 107 ntBASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 PRELID1P2-201ENST00000407805 396 ntBASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 ARL2BPP3-201ENST00000421226 480 ntBASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 OR5P4P-201ENST00000424698 917 ntBASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 EEF1A1P27-201ENST00000429983 1135 ntBASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 NIP7P1-201ENST00000433227 512 ntBASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 ISCA1P2-201ENST00000438679 421 ntBASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 SS18L2P1-201ENST00000445923 213 ntBASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.19□□□□□ -1.42
SSBP3Q9BWW4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms