Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 TROVE2-204ENST00000367445 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 RNPC3-201ENST00000423855 1872 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 NCOA4P4-201ENST00000513338 1861 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
USB1Q9BQ65 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8□□□□□ -1.13
USB1Q9BQ65 ZNF37BP-203ENST00000452306 1352 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 TP63-211ENST00000449992 1506 ntTSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 ARMC8-218ENST00000485396 1920 ntTSL 2 BASIC8□□□□□ -1.13
USB1Q9BQ65 KCTD16-202ENST00000512467 2313 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 KCNH5-204ENST00000420622 2711 ntTSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 BPNT1-205ENST00000469520 2737 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
USB1Q9BQ65 R3HDM2-207ENST00000441731 4076 ntTSL 5 BASIC8□□□□□ -1.13
USB1Q9BQ65 SORL1-211ENST00000532694 3692 ntTSL 2 BASIC8□□□□□ -1.13
USB1Q9BQ65 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC8□□□□□ -1.13
USB1Q9BQ65 RPL23AP7-202ENST00000416673 2078 ntTSL 2 BASIC8□□□□□ -1.13
USB1Q9BQ65 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC8□□□□□ -1.13
USB1Q9BQ65 DEFA5-201ENST00000330590 449 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 RN7SKP72-201ENST00000362327 292 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 RNU6-1339P-201ENST00000363574 91 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 MIR217-201ENST00000384817 110 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC8□□□□□ -1.13
USB1Q9BQ65 NDUFA3-202ENST00000391762 435 ntTSL 5 BASIC8□□□□□ -1.13
USB1Q9BQ65 AL122016.1-201ENST00000403365 367 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 RPL23AP47-201ENST00000408017 460 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 RNU6-908P-201ENST00000410160 94 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 AC097059.2-201ENST00000414039 592 ntTSL 3 BASIC8□□□□□ -1.13
USB1Q9BQ65 AC009310.1-201ENST00000414414 451 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 CYCSP5-201ENST00000415043 297 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8□□□□□ -1.13
USB1Q9BQ65 AC018630.2-202ENST00000422992 927 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 GAPDHP51-201ENST00000426454 1000 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 Z93242.1-201ENST00000427102 353 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 DSTNP5-201ENST00000427921 523 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 AC119428.1-201ENST00000429099 383 ntTSL 3 BASIC8□□□□□ -1.13
USB1Q9BQ65 PPIAP17-201ENST00000438507 471 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC8□□□□□ -1.13
USB1Q9BQ65 HIPK1-AS1-203ENST00000441071 571 ntTSL 3 BASIC8□□□□□ -1.13
USB1Q9BQ65 MTND6P13-201ENST00000443510 523 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 OR52I1-201ENST00000450052 1050 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC8□□□□□ -1.13
USB1Q9BQ65 DNAJC19P8-201ENST00000452887 259 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 AL596188.1-201ENST00000452888 370 ntTSL 5 BASIC8□□□□□ -1.13
USB1Q9BQ65 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC8□□□□□ -1.13
USB1Q9BQ65 RPL5P15-201ENST00000475870 897 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 RN7SL316P-201ENST00000483452 272 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 RN7SL236P-201ENST00000484759 284 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 RN7SL800P-201ENST00000484823 280 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 RPL12P37-201ENST00000486874 495 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 AC093278.1-201ENST00000494700 600 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 RN7SL62P-201ENST00000498506 297 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC8□□□□□ -1.13
USB1Q9BQ65 AC106795.1-207ENST00000507037 1123 ntTSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 AC010307.4-202ENST00000507403 389 ntTSL 3 BASIC8□□□□□ -1.13
USB1Q9BQ65 RNU6-277P-201ENST00000516272 106 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC8□□□□□ -1.13
USB1Q9BQ65 CASC19-203ENST00000523510 575 ntTSL 3 BASIC8□□□□□ -1.13
USB1Q9BQ65 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC8□□□□□ -1.13
USB1Q9BQ65 PGA4-202ENST00000537932 840 ntTSL 2 BASIC8□□□□□ -1.13
USB1Q9BQ65 PGA3-204ENST00000538258 867 ntTSL 2 BASIC8□□□□□ -1.13
USB1Q9BQ65 PGA3-207ENST00000543125 968 ntTSL 2 BASIC8□□□□□ -1.13
USB1Q9BQ65 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC8□□□□□ -1.13
USB1Q9BQ65 PGA4-206ENST00000544899 867 ntTSL 2 BASIC8□□□□□ -1.13
USB1Q9BQ65 AC020612.1-201ENST00000547655 541 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 AC074032.1-202ENST00000552815 467 ntTSL 3 BASIC8□□□□□ -1.13
USB1Q9BQ65 HNRNPC-227ENST00000556897 1252 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 AC104261.1-202ENST00000557946 509 ntTSL 3 BASIC8□□□□□ -1.13
USB1Q9BQ65 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC8□□□□□ -1.13
USB1Q9BQ65 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC8□□□□□ -1.13
USB1Q9BQ65 SSH2-209ENST00000579954 428 ntTSL 3 BASIC8□□□□□ -1.13
USB1Q9BQ65 MIR3171-201ENST00000584270 74 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 AC244255.1-201ENST00000613463 398 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 AL355974.3-201ENST00000617383 467 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 SNX18P5-201ENST00000619873 868 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 AL590644.1-202ENST00000634972 590 ntTSL 3 BASIC8□□□□□ -1.13
USB1Q9BQ65 AC183089.2-201ENST00000637931 916 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 AC008985.1-201ENST00000624169 2239 ntBASIC8□□□□□ -1.13
USB1Q9BQ65 AL512310.11-201ENST00000611741 1837 ntTSL 5 BASIC8□□□□□ -1.13
USB1Q9BQ65 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC8□□□□□ -1.13
USB1Q9BQ65 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC8□□□□□ -1.13
USB1Q9BQ65 SLF2-203ENST00000370271 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 AGBL4-204ENST00000371839 2947 ntAPPRIS P2 TSL 2 BASIC8□□□□□ -1.13
USB1Q9BQ65 FGF5-201ENST00000312465 4555 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 ZNF322-202ENST00000456172 4718 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
USB1Q9BQ65 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
USB1Q9BQ65 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8□□□□□ -1.13
USB1Q9BQ65 CLUL1-203ENST00000540035 2199 ntTSL 2 BASIC8□□□□□ -1.13
USB1Q9BQ65 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC8□□□□□ -1.13
USB1Q9BQ65 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
USB1Q9BQ65 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
USB1Q9BQ65 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms