Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LRRC4C-203ENST00000528697 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LRCH3Q96II8 FCGR3B-201ENST00000294800 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LRCH3Q96II8 FOXR2-201ENST00000339140 1926 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
LRCH3Q96II8 MKL2-207ENST00000573051 1938 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
LRCH3Q96II8 SLC9B1P1-201ENST00000331172 1337 ntBASIC9.01□□□□□ -0.97
LRCH3Q96II8 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
LRCH3Q96II8 AC239859.1-201ENST00000449715 2594 ntBASIC9.01□□□□□ -0.97
LRCH3Q96II8 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC9.01□□□□□ -0.97
LRCH3Q96II8 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC9.01□□□□□ -0.97
LRCH3Q96II8 CAGE1-202ENST00000338150 2771 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
LRCH3Q96II8 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
LRCH3Q96II8 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 CLDN2-201ENST00000336803 2959 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
LRCH3Q96II8 AC079097.1-201ENST00000512187 1399 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 CD59-203ENST00000415002 1878 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 GOSR2-234ENST00000640138 3408 ntTSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 TMEM231-201ENST00000258173 4278 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC9□□□□□ -0.97
LRCH3Q96II8 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 ZNF763-201ENST00000343949 2621 ntAPPRIS P2 TSL 2 BASIC9□□□□□ -0.97
LRCH3Q96II8 CCDC144B-201ENST00000285176 4310 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC9□□□□□ -0.97
LRCH3Q96II8 Y_RNA.58-201ENST00000362807 102 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 Y_RNA.154-201ENST00000363624 102 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 RNY3P1-201ENST00000365085 102 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 RNY3-201ENST00000365484 102 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 Y_RNA.490-201ENST00000384413 102 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 MIR621-201ENST00000384919 96 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 CALM2P3-201ENST00000400429 449 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC9□□□□□ -0.97
LRCH3Q96II8 KCNIP1-204ENST00000411494 684 ntTSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC9□□□□□ -0.97
LRCH3Q96II8 PPIAP23-201ENST00000420099 497 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC9□□□□□ -0.97
LRCH3Q96II8 AC104843.2-201ENST00000427666 297 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 SAR1AP4-201ENST00000429225 591 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 RPSAP62-201ENST00000432596 833 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 AC007563.3-201ENST00000433233 371 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 FMO7P-201ENST00000436045 768 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC9□□□□□ -0.97
LRCH3Q96II8 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC9□□□□□ -0.97
LRCH3Q96II8 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC9□□□□□ -0.97
LRCH3Q96II8 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC9□□□□□ -0.97
LRCH3Q96II8 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC9□□□□□ -0.97
LRCH3Q96II8 SLC25A15P2-201ENST00000457292 338 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 PNPLA4P1-201ENST00000458328 305 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC9□□□□□ -0.97
LRCH3Q96II8 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC9□□□□□ -0.97
LRCH3Q96II8 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC9□□□□□ -0.97
LRCH3Q96II8 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC9□□□□□ -0.97
LRCH3Q96II8 PTK2-241ENST00000522950 548 ntTSL 4 BASIC9□□□□□ -0.97
LRCH3Q96II8 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 AP002360.1-204ENST00000529331 700 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
LRCH3Q96II8 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC9□□□□□ -0.97
LRCH3Q96II8 GTF2IP22-201ENST00000554443 182 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC9□□□□□ -0.97
LRCH3Q96II8 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC9□□□□□ -0.97
LRCH3Q96II8 BNIP3P26-201ENST00000600827 554 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 AC022239.4-201ENST00000602626 504 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 MESTIT1_2.1-201ENST00000616328 235 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 AL121985.2-201ENST00000621192 555 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 YWHAEP7-203ENST00000622054 312 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC9□□□□□ -0.97
LRCH3Q96II8 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC9□□□□□ -0.97
LRCH3Q96II8 SLITRK3-202ENST00000475390 4555 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC9□□□□□ -0.97
LRCH3Q96II8 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 EEF1A1P30-201ENST00000429708 1315 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 GPR82-201ENST00000302548 3349 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LRCH3Q96II8 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 NBPF14-205ENST00000614329 2051 ntTSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 NBPF26-205ENST00000615219 2051 ntTSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 NBPF14-207ENST00000616120 2051 ntTSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 NBPF12-207ENST00000617864 2051 ntTSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 NBPF20-204ENST00000620821 2051 ntTSL 5 BASIC9□□□□□ -0.97
LRCH3Q96II8 HSPD1P5-201ENST00000511127 1720 ntBASIC9□□□□□ -0.97
LRCH3Q96II8 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 LUCAT1-203ENST00000513626 2672 ntTSL 2 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 ADAM21P1-201ENST00000529267 2170 ntBASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms