Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.72□□□□□ -1.17
SNED1Q8TER0 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 U3.43-201ENST00000410734 213 ntBASIC7.72□□□□□ -1.17
SNED1Q8TER0 RN7SKP286-201ENST00000410894 299 ntBASIC7.72□□□□□ -1.17
SNED1Q8TER0 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.72□□□□□ -1.17
SNED1Q8TER0 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.72□□□□□ -1.17
SNED1Q8TER0 BX284632.2-201ENST00000421091 399 ntBASIC7.72□□□□□ -1.17
SNED1Q8TER0 DUTP4-201ENST00000424782 475 ntBASIC7.72□□□□□ -1.17
SNED1Q8TER0 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.72□□□□□ -1.17
SNED1Q8TER0 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.72□□□□□ -1.17
SNED1Q8TER0 AL512605.1-202ENST00000441919 381 ntBASIC7.72□□□□□ -1.17
SNED1Q8TER0 AL359955.2-201ENST00000445380 353 ntBASIC7.72□□□□□ -1.17
SNED1Q8TER0 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
SNED1Q8TER0 IGKV2-19-201ENST00000518132 283 ntBASIC7.72□□□□□ -1.17
SNED1Q8TER0 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.72□□□□□ -1.17
SNED1Q8TER0 AC092375.1-201ENST00000550410 637 ntBASIC7.72□□□□□ -1.17
SNED1Q8TER0 MIR4489-201ENST00000578869 62 ntBASIC7.72□□□□□ -1.17
SNED1Q8TER0 AC090616.1-201ENST00000583895 447 ntBASIC7.72□□□□□ -1.17
SNED1Q8TER0 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.72□□□□□ -1.17
SNED1Q8TER0 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.72□□□□□ -1.17
SNED1Q8TER0 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.72□□□□□ -1.17
SNED1Q8TER0 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.72□□□□□ -1.17
SNED1Q8TER0 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
SNED1Q8TER0 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
SNED1Q8TER0 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 RBMY1HP-201ENST00000382759 1389 ntBASIC7.72□□□□□ -1.17
SNED1Q8TER0 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC7.72□□□□□ -1.17
SNED1Q8TER0 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
SNED1Q8TER0 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SNED1Q8TER0 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SNED1Q8TER0 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SNED1Q8TER0 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SNED1Q8TER0 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 MIR323A-201ENST00000362199 86 ntBASIC7.71□□□□□ -1.17
SNED1Q8TER0 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 AL391361.1-201ENST00000405580 489 ntBASIC7.71□□□□□ -1.17
SNED1Q8TER0 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 AC005077.1-201ENST00000449226 375 ntBASIC7.71□□□□□ -1.17
SNED1Q8TER0 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 AC002456.2-201ENST00000509356 380 ntBASIC7.71□□□□□ -1.17
SNED1Q8TER0 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 AP000648.1-201ENST00000529682 397 ntBASIC7.71□□□□□ -1.17
SNED1Q8TER0 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 AC092121.1-201ENST00000569452 202 ntBASIC7.71□□□□□ -1.17
SNED1Q8TER0 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 AL031601.1-201ENST00000605702 394 ntBASIC7.71□□□□□ -1.17
SNED1Q8TER0 AL352984.2-201ENST00000611153 546 ntBASIC7.71□□□□□ -1.17
SNED1Q8TER0 RFPL4AP6-201ENST00000616792 846 ntBASIC7.71□□□□□ -1.17
SNED1Q8TER0 AC005393.1-201ENST00000617916 584 ntBASIC7.71□□□□□ -1.17
SNED1Q8TER0 AC012653.2-201ENST00000621880 420 ntBASIC7.71□□□□□ -1.17
SNED1Q8TER0 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
SNED1Q8TER0 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SNED1Q8TER0 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
SNED1Q8TER0 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.71□□□□□ -1.18
SNED1Q8TER0 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
SNED1Q8TER0 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.71□□□□□ -1.18
SNED1Q8TER0 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.71□□□□□ -1.18
SNED1Q8TER0 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SNED1Q8TER0 AC131649.2-201ENST00000624925 4439 ntBASIC7.71□□□□□ -1.18
SNED1Q8TER0 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.71□□□□□ -1.18
SNED1Q8TER0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SNED1Q8TER0 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SNED1Q8TER0 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SNED1Q8TER0 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SNED1Q8TER0 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SNED1Q8TER0 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.71□□□□□ -1.18
SNED1Q8TER0 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SNED1Q8TER0 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SNED1Q8TER0 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNED1Q8TER0 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNED1Q8TER0 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SNED1Q8TER0 MIR1178-201ENST00000408396 91 ntBASIC7.7□□□□□ -1.18
SNED1Q8TER0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.7□□□□□ -1.18
SNED1Q8TER0 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.7□□□□□ -1.18
SNED1Q8TER0 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.7□□□□□ -1.18
SNED1Q8TER0 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.7□□□□□ -1.18
SNED1Q8TER0 IGHV3-57-201ENST00000520143 280 ntBASIC7.7□□□□□ -1.18
SNED1Q8TER0 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.7□□□□□ -1.18
SNED1Q8TER0 AL121579.2-201ENST00000555466 590 ntBASIC7.7□□□□□ -1.18
SNED1Q8TER0 SNORD95-201ENST00000579879 68 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms