Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AP001496.3-201ENST00000580230 913 ntBASIC4.98□□□□□ -1.61
VPS13CQ709C8 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 AF230666.2-201ENST00000602328 725 ntBASIC4.98□□□□□ -1.61
VPS13CQ709C8 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13CQ709C8 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13CQ709C8 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 PCDHA10-203ENST00000562220 12358 ntBASIC4.98□□□□□ -1.61
VPS13CQ709C8 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 RPS7P3-201ENST00000443360 580 ntBASIC4.98□□□□□ -1.61
VPS13CQ709C8 AL356981.1-201ENST00000454879 684 ntBASIC4.98□□□□□ -1.61
VPS13CQ709C8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS13CQ709C8 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS13CQ709C8 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS13CQ709C8 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 ARHGEF9-232ENST00000637417 5114 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS13CQ709C8 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS13CQ709C8 METTL15P3-201ENST00000415522 1221 ntBASIC4.97□□□□□ -1.61
VPS13CQ709C8 FTH1P20-201ENST00000434913 548 ntBASIC4.97□□□□□ -1.61
VPS13CQ709C8 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 AC092967.1-201ENST00000449016 481 ntBASIC4.97□□□□□ -1.61
VPS13CQ709C8 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 RPL10P14-201ENST00000565265 298 ntBASIC4.97□□□□□ -1.61
VPS13CQ709C8 RNF138P2-201ENST00000603490 592 ntBASIC4.97□□□□□ -1.61
VPS13CQ709C8 AC087269.2-201ENST00000641764 975 ntBASIC4.97□□□□□ -1.61
VPS13CQ709C8 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS13CQ709C8 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS13CQ709C8 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS13CQ709C8 AC068870.1-201ENST00000563737 2455 ntBASIC4.97□□□□□ -1.61
VPS13CQ709C8 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS13CQ709C8 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS13CQ709C8 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS13CQ709C8 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS13CQ709C8 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 RN7SL346P-201ENST00000491561 294 ntBASIC4.97□□□□□ -1.61
VPS13CQ709C8 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 TXNP4-201ENST00000575018 310 ntBASIC4.97□□□□□ -1.61
VPS13CQ709C8 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS13CQ709C8 COL14A1-203ENST00000309791 6163 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS13CQ709C8 AC104964.3-201ENST00000606115 2860 ntBASIC4.97□□□□□ -1.61
VPS13CQ709C8 NMNAT2-202ENST00000294868 5448 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS13CQ709C8 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
VPS13CQ709C8 MIR1204-201ENST00000408388 67 ntBASIC4.96□□□□□ -1.61
VPS13CQ709C8 MRPL53P1-201ENST00000414323 319 ntBASIC4.96□□□□□ -1.61
VPS13CQ709C8 CYCSP12-201ENST00000437729 300 ntBASIC4.96□□□□□ -1.61
VPS13CQ709C8 AC108161.1-201ENST00000461060 402 ntBASIC4.96□□□□□ -1.61
VPS13CQ709C8 AP001922.4-201ENST00000526967 290 ntBASIC4.96□□□□□ -1.61
VPS13CQ709C8 TAS2R6P-201ENST00000605022 826 ntBASIC4.96□□□□□ -1.61
VPS13CQ709C8 AL645933.2-201ENST00000606743 1207 ntBASIC4.96□□□□□ -1.61
VPS13CQ709C8 AC126915.2-201ENST00000610957 190 ntBASIC4.96□□□□□ -1.61
VPS13CQ709C8 AC012653.2-201ENST00000621880 420 ntBASIC4.96□□□□□ -1.61
VPS13CQ709C8 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
VPS13CQ709C8 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
VPS13CQ709C8 KANK1-210ENST00000619269 5688 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
VPS13CQ709C8 LAMA1-201ENST00000389658 9657 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VPS13CQ709C8 DEPDC5-202ENST00000382112 5363 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VPS13CQ709C8 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
VPS13CQ709C8 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC4.96□□□□□ -1.61
VPS13CQ709C8 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
VPS13CQ709C8 C1orf116-201ENST00000359470 5493 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 RN7SKP166-201ENST00000410812 305 ntBASIC4.96□□□□□ -1.62
VPS13CQ709C8 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 AC072052.1-201ENST00000496556 306 ntBASIC4.96□□□□□ -1.62
VPS13CQ709C8 RNA5SP92-201ENST00000516437 110 ntBASIC4.96□□□□□ -1.62
VPS13CQ709C8 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 SMARCA2-263ENST00000637806 7061 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 PRDM1-201ENST00000369089 4675 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms