Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC106800.2-201ENST00000514009 1103 ntBASIC5.32□□□□□ -1.56
LMO4P61968 AC006518.1-201ENST00000541449 943 ntBASIC5.32□□□□□ -1.56
LMO4P61968 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.32□□□□□ -1.56
LMO4P61968 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.32□□□□□ -1.56
LMO4P61968 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.32□□□□□ -1.56
LMO4P61968 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC5.32□□□□□ -1.56
LMO4P61968 AC090616.1-201ENST00000583895 447 ntBASIC5.32□□□□□ -1.56
LMO4P61968 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.32□□□□□ -1.56
LMO4P61968 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.32□□□□□ -1.56
LMO4P61968 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.32□□□□□ -1.56
LMO4P61968 AC026790.2-201ENST00000606282 430 ntBASIC5.32□□□□□ -1.56
LMO4P61968 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.32□□□□□ -1.56
LMO4P61968 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LMO4P61968 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
LMO4P61968 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC5.32□□□□□ -1.56
LMO4P61968 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
LMO4P61968 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC5.32□□□□□ -1.56
LMO4P61968 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LMO4P61968 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
LMO4P61968 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
LMO4P61968 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.31□□□□□ -1.56
LMO4P61968 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
LMO4P61968 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 RN7SKP15-201ENST00000364742 309 ntBASIC5.31□□□□□ -1.56
LMO4P61968 RN7SKP240-201ENST00000410583 375 ntBASIC5.31□□□□□ -1.56
LMO4P61968 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.31□□□□□ -1.56
LMO4P61968 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.31□□□□□ -1.56
LMO4P61968 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.31□□□□□ -1.56
LMO4P61968 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 AC079807.1-201ENST00000429993 481 ntBASIC5.31□□□□□ -1.56
LMO4P61968 AC112492.2-201ENST00000432774 1030 ntBASIC5.31□□□□□ -1.56
LMO4P61968 HMGN1P2-201ENST00000445197 310 ntBASIC5.31□□□□□ -1.56
LMO4P61968 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LMO4P61968 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 OR52I1-201ENST00000450052 1050 ntBASIC5.31□□□□□ -1.56
LMO4P61968 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.31□□□□□ -1.56
LMO4P61968 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.31□□□□□ -1.56
LMO4P61968 RN7SL705P-201ENST00000481678 294 ntBASIC5.31□□□□□ -1.56
LMO4P61968 AC095052.1-201ENST00000509955 863 ntBASIC5.31□□□□□ -1.56
LMO4P61968 OR51A1P-201ENST00000511110 946 ntBASIC5.31□□□□□ -1.56
LMO4P61968 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.31□□□□□ -1.56
LMO4P61968 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.31□□□□□ -1.56
LMO4P61968 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.31□□□□□ -1.56
LMO4P61968 AC009879.1-201ENST00000520029 839 ntBASIC5.31□□□□□ -1.56
LMO4P61968 IGHV4-55-201ENST00000520889 368 ntBASIC5.31□□□□□ -1.56
LMO4P61968 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC5.31□□□□□ -1.56
LMO4P61968 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.31□□□□□ -1.56
LMO4P61968 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.31□□□□□ -1.56
LMO4P61968 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.31□□□□□ -1.56
LMO4P61968 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.31□□□□□ -1.56
LMO4P61968 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.31□□□□□ -1.56
LMO4P61968 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.31□□□□□ -1.56
LMO4P61968 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.31□□□□□ -1.56
LMO4P61968 AC020658.4-201ENST00000613987 684 ntBASIC5.31□□□□□ -1.56
LMO4P61968 AC022960.2-201ENST00000616300 666 ntBASIC5.31□□□□□ -1.56
LMO4P61968 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.31□□□□□ -1.56
LMO4P61968 MRPL57P1-201ENST00000621486 265 ntBASIC5.31□□□□□ -1.56
LMO4P61968 AC025262.3-201ENST00000623666 360 ntBASIC5.31□□□□□ -1.56
LMO4P61968 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.31□□□□□ -1.56
LMO4P61968 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.31□□□□□ -1.56
LMO4P61968 OR7E91P-202ENST00000642062 1198 ntBASIC5.31□□□□□ -1.56
LMO4P61968 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
LMO4P61968 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 QRSL1P1-201ENST00000400977 1540 ntBASIC5.31□□□□□ -1.56
LMO4P61968 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 MELK-207ENST00000536860 2342 ntTSL 2 BASIC5.31□□□□□ -1.56
LMO4P61968 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
LMO4P61968 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LMO4P61968 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LMO4P61968 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.3□□□□□ -1.56
LMO4P61968 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LMO4P61968 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.3□□□□□ -1.56
LMO4P61968 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LMO4P61968 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LMO4P61968 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC5.3□□□□□ -1.56
LMO4P61968 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms