Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 KIAA1257-201ENST00000265068 6034 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 AKAP2-202ENST00000374525 6866 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 ITIH6-201ENST00000218436 4968 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC6.66□□□□□ -1.34
BRCA2P51587 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 GDA-202ENST00000358399 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.66□□□□□ -1.34
BRCA2P51587 RAB28P2-201ENST00000454299 641 ntBASIC6.66□□□□□ -1.34
BRCA2P51587 AC110056.1-201ENST00000525759 911 ntBASIC6.66□□□□□ -1.34
BRCA2P51587 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.66□□□□□ -1.34
BRCA2P51587 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.66□□□□□ -1.34
BRCA2P51587 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.66□□□□□ -1.34
BRCA2P51587 KIF26B-201ENST00000366518 12113 ntTSL 5 BASIC6.66□□□□□ -1.34
BRCA2P51587 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC6.66□□□□□ -1.34
BRCA2P51587 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC6.66□□□□□ -1.34
BRCA2P51587 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.66□□□□□ -1.34
BRCA2P51587 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.66□□□□□ -1.34
BRCA2P51587 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
BRCA2P51587 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 AC105114.1-201ENST00000624795 1862 ntBASIC6.66□□□□□ -1.34
BRCA2P51587 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
BRCA2P51587 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.66□□□□□ -1.34
BRCA2P51587 AL355375.1-201ENST00000405686 392 ntBASIC6.66□□□□□ -1.34
BRCA2P51587 OR2W4P-201ENST00000406496 926 ntBASIC6.66□□□□□ -1.34
BRCA2P51587 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.66□□□□□ -1.34
BRCA2P51587 AC016027.4-201ENST00000450866 277 ntBASIC6.66□□□□□ -1.34
BRCA2P51587 AC006463.2-201ENST00000473326 348 ntBASIC6.66□□□□□ -1.34
BRCA2P51587 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.66□□□□□ -1.34
BRCA2P51587 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.66□□□□□ -1.34
BRCA2P51587 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.66□□□□□ -1.34
BRCA2P51587 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.66□□□□□ -1.34
BRCA2P51587 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 PRDM15-202ENST00000398548 6654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.66□□□□□ -1.34
BRCA2P51587 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
BRCA2P51587 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
BRCA2P51587 RN7SKP29-201ENST00000410957 272 ntBASIC6.66□□□□□ -1.34
BRCA2P51587 Z84478.1-201ENST00000438230 1219 ntBASIC6.66□□□□□ -1.34
BRCA2P51587 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.66□□□□□ -1.34
BRCA2P51587 RN7SL817P-201ENST00000480777 288 ntBASIC6.66□□□□□ -1.34
BRCA2P51587 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.66□□□□□ -1.34
BRCA2P51587 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.66□□□□□ -1.34
BRCA2P51587 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.66□□□□□ -1.34
BRCA2P51587 TIA1-203ENST00000415783 4633 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
BRCA2P51587 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
BRCA2P51587 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
BRCA2P51587 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
BRCA2P51587 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
BRCA2P51587 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
BRCA2P51587 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
BRCA2P51587 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
BRCA2P51587 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
BRCA2P51587 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.65□□□□□ -1.34
BRCA2P51587 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.65□□□□□ -1.34
BRCA2P51587 RPL7P61-201ENST00000451721 751 ntBASIC6.65□□□□□ -1.34
BRCA2P51587 RANP2-201ENST00000456833 229 ntBASIC6.65□□□□□ -1.34
BRCA2P51587 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.65□□□□□ -1.34
BRCA2P51587 AC106800.2-201ENST00000514009 1103 ntBASIC6.65□□□□□ -1.34
BRCA2P51587 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.65□□□□□ -1.34
BRCA2P51587 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.65□□□□□ -1.34
BRCA2P51587 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.65□□□□□ -1.34
BRCA2P51587 PPATP2-201ENST00000605635 508 ntBASIC6.65□□□□□ -1.34
BRCA2P51587 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.65□□□□□ -1.34
BRCA2P51587 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
BRCA2P51587 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
BRCA2P51587 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
BRCA2P51587 RPS2P45-201ENST00000469997 2057 ntBASIC6.65□□□□□ -1.34
BRCA2P51587 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
BRCA2P51587 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.65□□□□□ -1.35
BRCA2P51587 RPEP1-201ENST00000504507 658 ntBASIC6.65□□□□□ -1.35
BRCA2P51587 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
BRCA2P51587 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.65□□□□□ -1.35
BRCA2P51587 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.65□□□□□ -1.35
BRCA2P51587 SCN5A-207ENST00000449557 5898 ntTSL 5 BASIC6.65□□□□□ -1.35
BRCA2P51587 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC6.65□□□□□ -1.35
BRCA2P51587 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.65□□□□□ -1.35
BRCA2P51587 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
BRCA2P51587 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
BRCA2P51587 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.65□□□□□ -1.35
BRCA2P51587 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC6.65□□□□□ -1.35
BRCA2P51587 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
BRCA2P51587 RN7SKP128-201ENST00000364270 303 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCA2P51587 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
BRCA2P51587 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.64□□□□□ -1.35
BRCA2P51587 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.64□□□□□ -1.35
BRCA2P51587 GAPDHP23-201ENST00000444823 993 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 DEFA11P-201ENST00000446470 261 ntBASIC6.64□□□□□ -1.35
BRCA2P51587 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.64□□□□□ -1.35
BRCA2P51587 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms