Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
POLR2AP24928 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
POLR2AP24928 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
POLR2AP24928 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
POLR2AP24928 SNORD16-201ENST00000362803 99 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 U3.7-201ENST00000363668 216 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.44□□□□□ -1.22
POLR2AP24928 RPL35AP3-201ENST00000414680 288 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 RPL34P3-201ENST00000421454 338 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 MTATP6P11-201ENST00000428071 670 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.44□□□□□ -1.22
POLR2AP24928 CDK7P1-201ENST00000434574 693 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.44□□□□□ -1.22
POLR2AP24928 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.44□□□□□ -1.22
POLR2AP24928 SCARNA18.1-201ENST00000516330 83 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 AP003168.1-201ENST00000530091 307 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.44□□□□□ -1.22
POLR2AP24928 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.44□□□□□ -1.22
POLR2AP24928 AC017076.1-201ENST00000607613 578 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 AC024933.1-201ENST00000608472 348 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC7.44□□□□□ -1.22
POLR2AP24928 OR1N1-202ENST00000619659 939 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 AC116667.2-201ENST00000641075 823 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.44□□□□□ -1.22
POLR2AP24928 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
POLR2AP24928 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
POLR2AP24928 AC009237.3-203ENST00000442128 3551 ntBASIC7.44□□□□□ -1.22
POLR2AP24928 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.44□□□□□ -1.22
POLR2AP24928 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
POLR2AP24928 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
POLR2AP24928 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.44□□□□□ -1.22
POLR2AP24928 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
POLR2AP24928 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.43□□□□□ -1.22
POLR2AP24928 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC7.43□□□□□ -1.22
POLR2AP24928 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
POLR2AP24928 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
POLR2AP24928 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC7.43□□□□□ -1.22
POLR2AP24928 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC7.43□□□□□ -1.22
POLR2AP24928 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
POLR2AP24928 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
POLR2AP24928 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
POLR2AP24928 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC7.43□□□□□ -1.22
POLR2AP24928 AC093270.2-201ENST00000486157 792 ntBASIC7.43□□□□□ -1.22
POLR2AP24928 AC117395.1-201ENST00000487390 403 ntBASIC7.43□□□□□ -1.22
POLR2AP24928 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.43□□□□□ -1.22
POLR2AP24928 TMEM97P2-201ENST00000517841 403 ntBASIC7.43□□□□□ -1.22
POLR2AP24928 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.43□□□□□ -1.22
POLR2AP24928 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.43□□□□□ -1.22
POLR2AP24928 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.43□□□□□ -1.22
POLR2AP24928 OR8G3P-202ENST00000641572 1255 ntBASIC7.43□□□□□ -1.22
POLR2AP24928 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
POLR2AP24928 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
POLR2AP24928 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
POLR2AP24928 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
POLR2AP24928 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.43□□□□□ -1.22
POLR2AP24928 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
POLR2AP24928 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
POLR2AP24928 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
POLR2AP24928 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC7.43□□□□□ -1.22
POLR2AP24928 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
POLR2AP24928 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
POLR2AP24928 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
POLR2AP24928 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
POLR2AP24928 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.43□□□□□ -1.22
POLR2AP24928 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
POLR2AP24928 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.42□□□□□ -1.22
POLR2AP24928 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.42□□□□□ -1.22
POLR2AP24928 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC7.42□□□□□ -1.22
POLR2AP24928 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.42□□□□□ -1.22
POLR2AP24928 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.42□□□□□ -1.22
POLR2AP24928 Y_RNA.710-201ENST00000516975 110 ntBASIC7.42□□□□□ -1.22
POLR2AP24928 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.42□□□□□ -1.22
POLR2AP24928 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.42□□□□□ -1.22
POLR2AP24928 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.42□□□□□ -1.22
POLR2AP24928 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
POLR2AP24928 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.42□□□□□ -1.22
POLR2AP24928 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.42□□□□□ -1.22
POLR2AP24928 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.42□□□□□ -1.22
POLR2AP24928 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.42□□□□□ -1.22
POLR2AP24928 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.42□□□□□ -1.22
POLR2AP24928 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
POLR2AP24928 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
POLR2AP24928 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
POLR2AP24928 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.42□□□□□ -1.22
POLR2AP24928 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
POLR2AP24928 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
POLR2AP24928 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.42□□□□□ -1.22
POLR2AP24928 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.42□□□□□ -1.22
POLR2AP24928 CUBNP3-201ENST00000457461 1784 ntBASIC7.42□□□□□ -1.22
POLR2AP24928 AC104964.2-201ENST00000562242 4641 ntBASIC7.42□□□□□ -1.22
POLR2AP24928 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
POLR2AP24928 ZSWIM5P3-201ENST00000511265 2743 ntBASIC7.42□□□□□ -1.22
POLR2AP24928 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
POLR2AP24928 MIR143-201ENST00000385300 106 ntBASIC7.42□□□□□ -1.22
POLR2AP24928 AC245060.4-201ENST00000413293 1121 ntBASIC7.42□□□□□ -1.22
POLR2AP24928 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.42□□□□□ -1.22
POLR2AP24928 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.42□□□□□ -1.22
POLR2AP24928 BX323845.3-201ENST00000428215 527 ntBASIC7.42□□□□□ -1.22
POLR2AP24928 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
POLR2AP24928 AC092865.4-201ENST00000477936 615 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms