Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-DOBP13765 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HLA-DOBP13765 AC026956.1-201ENST00000558741 396 ntBASIC5.85□□□□□ -1.47
HLA-DOBP13765 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DOBP13765 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-DOBP13765 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-DOBP13765 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DOBP13765 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-DOBP13765 AC067852.5-201ENST00000589299 310 ntBASIC5.85□□□□□ -1.47
HLA-DOBP13765 AL513218.1-201ENST00000606527 391 ntBASIC5.85□□□□□ -1.47
HLA-DOBP13765 AC093635.1-201ENST00000609028 555 ntBASIC5.85□□□□□ -1.47
HLA-DOBP13765 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DOBP13765 AC007671.1-201ENST00000616957 830 ntBASIC5.85□□□□□ -1.47
HLA-DOBP13765 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.85□□□□□ -1.47
HLA-DOBP13765 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.85□□□□□ -1.47
HLA-DOBP13765 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DOBP13765 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-DOBP13765 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DOBP13765 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DOBP13765 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
HLA-DOBP13765 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
HLA-DOBP13765 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.85□□□□□ -1.47
HLA-DOBP13765 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-DOBP13765 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-DOBP13765 PARP4P1-201ENST00000435945 2337 ntBASIC5.85□□□□□ -1.47
HLA-DOBP13765 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.85□□□□□ -1.47
HLA-DOBP13765 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HLA-DOBP13765 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DOBP13765 AC105749.1-201ENST00000631338 2008 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DOBP13765 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DOBP13765 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.84□□□□□ -1.47
HLA-DOBP13765 AC010624.4-201ENST00000597606 1351 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DOBP13765 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HLA-DOBP13765 CR383656.5-201ENST00000547616 1340 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DOBP13765 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HLA-DOBP13765 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DOBP13765 RNU1-5P-201ENST00000362684 144 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 RNA5SP333-201ENST00000363466 118 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 RNA5SP334-201ENST00000364825 118 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DOBP13765 AL359092.1-201ENST00000417156 265 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.84□□□□□ -1.47
HLA-DOBP13765 AP003385.1-201ENST00000426387 893 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.84□□□□□ -1.47
HLA-DOBP13765 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.84□□□□□ -1.47
HLA-DOBP13765 CCNJP1-201ENST00000450600 1149 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 TAAR4P-201ENST00000454843 1039 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 AKR1D1P1-201ENST00000457236 936 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-DOBP13765 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
HLA-DOBP13765 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.84□□□□□ -1.47
HLA-DOBP13765 AC023818.1-201ENST00000498379 384 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 RNU2-45P-201ENST00000516068 187 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 SCARNA5-201ENST00000516201 276 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 RPL41P2-201ENST00000544920 409 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.84□□□□□ -1.47
HLA-DOBP13765 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-DOBP13765 AL591222.2-201ENST00000604443 754 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 AC139792.1-201ENST00000607051 647 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.84□□□□□ -1.47
HLA-DOBP13765 AC022726.2-201ENST00000634673 547 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 AL121936.2-201ENST00000641935 662 ntBASIC5.84□□□□□ -1.47
HLA-DOBP13765 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DOBP13765 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DOBP13765 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-DOBP13765 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-DOBP13765 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.84□□□□□ -1.47
HLA-DOBP13765 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
HLA-DOBP13765 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HLA-DOBP13765 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HLA-DOBP13765 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
HLA-DOBP13765 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-DOBP13765 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOBP13765 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOBP13765 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-DOBP13765 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DOBP13765 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DOBP13765 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-DOBP13765 RBPJP6-201ENST00000411556 1431 ntBASIC5.83□□□□□ -1.48
HLA-DOBP13765 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOBP13765 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOBP13765 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOBP13765 MAPK10-357ENST00000641831 2858 ntBASIC5.83□□□□□ -1.48
HLA-DOBP13765 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DOBP13765 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DOBP13765 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.83□□□□□ -1.48
HLA-DOBP13765 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HLA-DOBP13765 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
HLA-DOBP13765 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DOBP13765 RNA5SP188-201ENST00000362916 129 ntBASIC5.83□□□□□ -1.48
HLA-DOBP13765 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-DOBP13765 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HLA-DOBP13765 AC026310.1-201ENST00000396004 378 ntBASIC5.83□□□□□ -1.48
HLA-DOBP13765 AL023284.3-201ENST00000407767 334 ntBASIC5.83□□□□□ -1.48
HLA-DOBP13765 RANP6-201ENST00000413691 644 ntBASIC5.83□□□□□ -1.48
HLA-DOBP13765 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DOBP13765 RPL36P18-201ENST00000419316 318 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms