Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC018558.4-201ENST00000622153 281 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AC061999.1-201ENST00000624454 177 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AC011815.2-201ENST00000618230 2021 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.8□□□□□ -1.48
COPS3Q9UNS2 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.8□□□□□ -1.48
COPS3Q9UNS2 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 SNORA38B-201ENST00000363524 131 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC021876.1-201ENST00000425959 359 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 ETF1P1-206ENST00000427296 984 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 CR391992.1-201ENST00000438601 394 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 RPS16P9-201ENST00000477220 427 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 CARSP2-201ENST00000520688 277 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 SETP17-201ENST00000534163 817 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC007068.2-201ENST00000543168 395 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC090115.2-201ENST00000548060 883 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AL589935.2-201ENST00000616471 1231 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC007347.2-201ENST00000623044 180 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC005753.1-201ENST00000623837 618 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 MIR665-201ENST00000635949 72 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC140479.4-205ENST00000636339 820 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC087516.1-201ENST00000561236 2428 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AC119674.1-213ENST00000641177 1386 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.79□□□□□ -1.48
COPS3Q9UNS2 AP001157.1-201ENST00000550837 2339 ntBASIC5.79□□□□□ -1.48
COPS3Q9UNS2 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COPS3Q9UNS2 AC005725.1-201ENST00000577346 2607 ntBASIC5.78□□□□□ -1.48
COPS3Q9UNS2 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COPS3Q9UNS2 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COPS3Q9UNS2 AC093671.1-201ENST00000624981 2929 ntBASIC5.78□□□□□ -1.48
COPS3Q9UNS2 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COPS3Q9UNS2 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.78□□□□□ -1.48
COPS3Q9UNS2 LINC01616-201ENST00000561816 2280 ntBASIC5.78□□□□□ -1.48
COPS3Q9UNS2 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COPS3Q9UNS2 PSMC1P6-201ENST00000477233 1319 ntBASIC5.78□□□□□ -1.48
COPS3Q9UNS2 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
COPS3Q9UNS2 MSL3P1-202ENST00000440028 1468 ntBASIC5.78□□□□□ -1.48
COPS3Q9UNS2 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COPS3Q9UNS2 AC023245.2-201ENST00000530760 2978 ntBASIC5.78□□□□□ -1.48
COPS3Q9UNS2 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COPS3Q9UNS2 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.78□□□□□ -1.48
COPS3Q9UNS2 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
COPS3Q9UNS2 UBBP1-201ENST00000392399 473 ntBASIC5.78□□□□□ -1.48
COPS3Q9UNS2 LDHAP5-201ENST00000394996 622 ntBASIC5.78□□□□□ -1.48
COPS3Q9UNS2 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.78□□□□□ -1.48
COPS3Q9UNS2 AL590635.1-201ENST00000406314 586 ntBASIC5.78□□□□□ -1.48
COPS3Q9UNS2 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COPS3Q9UNS2 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.78□□□□□ -1.48
COPS3Q9UNS2 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms