Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KIAA1549Q9HCM3 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 CYP2G2P-201ENST00000594920 1485 ntBASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 PSMD10P2-201ENST00000432890 672 ntBASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 AC010240.2-201ENST00000445363 1205 ntBASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 BZW1P1-201ENST00000454901 1240 ntBASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 PLEKHA3P1-201ENST00000598554 894 ntBASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 AL365181.4-201ENST00000609800 547 ntBASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 BRD7P6-201ENST00000431406 1860 ntBASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 AC027279.1-201ENST00000568885 4284 ntBASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 PSMA6P1-201ENST00000400275 741 ntBASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 NDUFA5P5-201ENST00000468361 342 ntBASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 uc_338.31-201ENST00000615595 186 ntBASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 HSPD1P4-201ENST00000547203 1702 ntBASIC5.75□□□□□ -1.49
KIAA1549Q9HCM3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 OLMALINC-203ENST00000641087 3779 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 AC005618.1-201ENST00000606901 3148 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 AC125238.2-201ENST00000430003 1440 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 AC009120.2-204ENST00000621548 2032 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 MTND2P12-201ENST00000417560 1252 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 BMP6P1-201ENST00000431230 679 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 PFN1P8-201ENST00000497012 543 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 RNA5SP418-201ENST00000515951 117 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 RN7SKP35-201ENST00000517210 151 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 IGHV1-14-201ENST00000523391 241 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 CYCSP25-201ENST00000525280 316 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 FCF1-203ENST00000553615 954 ntTSL 3 BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 MIR4310-201ENST00000582950 57 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 AL513218.1-201ENST00000606527 391 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 AC015982.1-201ENST00000608113 465 ntBASIC5.74□□□□□ -1.49
KIAA1549Q9HCM3 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms