Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
CNTNAP3Q9BZ76 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNTNAP3Q9BZ76 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CNTNAP3Q9BZ76 MSRB3-212ENST00000614640 4270 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
CNTNAP3Q9BZ76 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC7.89□□□□□ -1.15
CNTNAP3Q9BZ76 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNTNAP3Q9BZ76 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CNTNAP3Q9BZ76 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AC125238.2-201ENST00000430003 1440 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 USP46-207ENST00000508499 1419 ntTSL 2 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AC106872.5-201ENST00000508856 1416 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 GLULP5-201ENST00000547831 1390 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AL353588.1-201ENST00000505802 3513 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 FRG1BP-201ENST00000278882 761 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 RNFT1P3-201ENST00000340898 1052 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 FRG1CP-201ENST00000358464 769 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 Y_RNA.144-201ENST00000363521 113 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 VTRNA1-2-201ENST00000365241 89 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AL079341.1-201ENST00000404701 1207 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 U3.33-201ENST00000408117 204 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AL158825.1-201ENST00000414735 521 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 OR4K6P-201ENST00000416478 897 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 EIF4A1P1-201ENST00000420241 934 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 HIGD1AP12-201ENST00000427832 281 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AC112492.2-201ENST00000432774 1030 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AL022324.2-201ENST00000434827 780 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 TRIM60P18-201ENST00000441518 828 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 BUD31P2-201ENST00000449374 300 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 RPS29P5-201ENST00000452777 171 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 RPS6P25-201ENST00000464444 748 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 RPS4XP17-201ENST00000479057 754 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 SNRPCP11-201ENST00000492453 205 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 IGHVII-30-1-201ENST00000522218 301 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 PTK2-241ENST00000522950 548 ntTSL 4 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 LINC00681-201ENST00000530150 504 ntTSL 2 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AL445383.1-201ENST00000554689 874 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 OR11J2P-201ENST00000555298 907 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AL355836.1-201ENST00000555951 870 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AL109628.1-201ENST00000556877 366 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 ANP32BP1-201ENST00000564205 1297 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AP000860.1-201ENST00000605250 559 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 CGA-202ENST00000610310 615 ntTSL 3 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 uc_338.30-201ENST00000612038 168 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AL357080.1-201ENST00000617394 239 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 LINC00710-219ENST00000635054 938 ntTSL 5 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AC243725.1-201ENST00000637164 436 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 AC247036.7-201ENST00000639643 304 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 STEAP3-AS1-201ENST00000454260 3218 ntTSL 2 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 LINC01347-202ENST00000627498 3841 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 SFR1-202ENST00000369729 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 MKL2-207ENST00000573051 1938 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
CNTNAP3Q9BZ76 SLC9A6-209ENST00000636347 4867 ntTSL 5 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms