Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 AC025809.2-201ENST00000625085 1802 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 RNA5SP321-201ENST00000362722 111 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 SETP10-201ENST00000424368 814 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 AC106901.1-201ENST00000425086 698 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 Z68868.1-201ENST00000429048 544 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 AC114878.1-201ENST00000441166 358 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 RNU7-157P-201ENST00000459600 66 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 AC093325.1-201ENST00000508378 326 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 AC026688.1-201ENST00000520639 1168 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 IGLV3-6-201ENST00000523937 250 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 GTF2IP11-201ENST00000526931 420 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 GNG2-203ENST00000553432 577 ntTSL 4 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 AL049840.5-201ENST00000602827 552 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 RPS4XP21-201ENST00000603814 750 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 AL035425.4-201ENST00000624509 1063 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 AC016251.2-201ENST00000623393 3089 ntBASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CDK5RAP3Q96JB5 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC004023.1-201ENST00000561473 1744 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AL031651.1-201ENST00000615357 1438 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC013268.2-201ENST00000420753 337 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 FABP5P1-201ENST00000423401 411 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 EIF2S2P3-201ENST00000428356 999 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 FABP5P2-201ENST00000439042 408 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC022080.2-201ENST00000452932 533 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AL139156.3-201ENST00000454802 394 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 RN7SL372P-201ENST00000461982 298 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 RN7SL37P-201ENST00000490461 307 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 RPL37AP8-201ENST00000494116 276 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 OR5D2P-201ENST00000524390 911 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC092474.3-201ENST00000603022 568 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AL591222.2-201ENST00000604443 754 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC005972.3-201ENST00000606304 481 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC139792.1-201ENST00000607051 647 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC092953.2-201ENST00000608000 699 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AL137000.1-201ENST00000610528 1244 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC007671.1-201ENST00000616957 830 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC005393.1-201ENST00000617916 584 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC012653.2-201ENST00000621880 420 ntBASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AC106730.3-201ENST00000624568 641 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms