Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AL008726.1-201ENST00000607703 569 ntTSL 4 BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 DLEU2_1.1-201ENST00000612089 120 ntBASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 DLEU2_1.2-201ENST00000614667 120 ntBASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 AC090517.2-201ENST00000614966 680 ntBASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 AP005264.7-201ENST00000625003 745 ntBASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 MMP3-201ENST00000299855 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RSPO4Q2I0M5 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 LINC02436-202ENST00000509017 2186 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 ATP5F1P3-201ENST00000397213 657 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AL136310.1-201ENST00000404926 654 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 MIR1266-201ENST00000408125 84 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 NPM1P30-201ENST00000425092 828 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 TRIM60P10Y-201ENST00000425589 751 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 HMGB1P31-201ENST00000437242 427 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AL031681.1-201ENST00000443304 400 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 ARL2BPP7-201ENST00000446421 490 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 USP9YP34-201ENST00000453983 808 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 RPL7P45-201ENST00000455851 743 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 OR9A3P-202ENST00000485185 878 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AC023424.2-201ENST00000493479 777 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 HMGN1P17-201ENST00000513734 295 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 RNU6-405P-201ENST00000516637 110 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AC023946.1-201ENST00000526867 594 ntTSL 3 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 OR6C7P-201ENST00000547875 934 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 NPM1P45-201ENST00000583151 559 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 VN1R82P-201ENST00000601481 356 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AC011500.1-201ENST00000601963 469 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AC090970.3-201ENST00000612566 866 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AC006338.1-201ENST00000618453 749 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 SAMMSON-209ENST00000641222 1100 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 SLC16A1P1-201ENST00000486743 1510 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 SPDYE9P-202ENST00000571071 2024 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 SPDYE11-203ENST00000573748 2024 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 TRIM60P14-201ENST00000513444 1419 ntBASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 HHAT-204ENST00000413764 3575 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
RSPO4Q2I0M5 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms