Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 PCA3_2.1-201ENST00000612507 409 ntBASIC6.38□□□□□ -1.39
SHMT2P34897 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.38□□□□□ -1.39
SHMT2P34897 AC114546.4-201ENST00000624413 369 ntBASIC6.38□□□□□ -1.39
SHMT2P34897 AC018659.2-201ENST00000624690 715 ntBASIC6.38□□□□□ -1.39
SHMT2P34897 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHMT2P34897 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.38□□□□□ -1.39
SHMT2P34897 AC022613.3-201ENST00000560740 1346 ntBASIC6.38□□□□□ -1.39
SHMT2P34897 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.38□□□□□ -1.39
SHMT2P34897 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.38□□□□□ -1.39
SHMT2P34897 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SHMT2P34897 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHMT2P34897 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SHMT2P34897 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SHMT2P34897 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.38□□□□□ -1.39
SHMT2P34897 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.38□□□□□ -1.39
SHMT2P34897 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHMT2P34897 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SHMT2P34897 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.38□□□□□ -1.39
SHMT2P34897 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SHMT2P34897 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SHMT2P34897 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHMT2P34897 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SHMT2P34897 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.37□□□□□ -1.39
SHMT2P34897 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHMT2P34897 TMCC1P1-201ENST00000518897 1980 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 CUBNP3-201ENST00000457461 1784 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.37□□□□□ -1.39
SHMT2P34897 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.37□□□□□ -1.39
SHMT2P34897 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHMT2P34897 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SHMT2P34897 RNU1-46P-201ENST00000384425 164 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 AC245036.1-201ENST00000391727 309 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.37□□□□□ -1.39
SHMT2P34897 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHMT2P34897 GPN3P1-201ENST00000423883 535 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.37□□□□□ -1.39
SHMT2P34897 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.37□□□□□ -1.39
SHMT2P34897 AC128677.1-201ENST00000436016 442 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHMT2P34897 RPL12P49-201ENST00000441100 121 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 KF459542.1-201ENST00000450908 553 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 RPL23AP68-201ENST00000480924 445 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHMT2P34897 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHMT2P34897 RPL19P11-201ENST00000495944 589 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.37□□□□□ -1.39
SHMT2P34897 AC131392.1-201ENST00000506490 633 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 AC138517.1-201ENST00000515724 568 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 IGHV3-57-201ENST00000520143 280 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.37□□□□□ -1.39
SHMT2P34897 KCTD9P4-201ENST00000526766 1166 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.37□□□□□ -1.39
SHMT2P34897 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.37□□□□□ -1.39
SHMT2P34897 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.37□□□□□ -1.39
SHMT2P34897 AC026956.1-201ENST00000558741 396 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.37□□□□□ -1.39
SHMT2P34897 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.37□□□□□ -1.39
SHMT2P34897 SYPL1P2-201ENST00000582878 727 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.37□□□□□ -1.39
SHMT2P34897 BUB1P1-201ENST00000603541 607 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 AC012653.2-201ENST00000621880 420 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHMT2P34897 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHMT2P34897 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHMT2P34897 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
SHMT2P34897 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.37□□□□□ -1.39
SHMT2P34897 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SHMT2P34897 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.37□□□□□ -1.39
SHMT2P34897 PARP4P1-201ENST00000435945 2337 ntBASIC6.37□□□□□ -1.39
SHMT2P34897 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
SHMT2P34897 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.37□□□□□ -1.39
SHMT2P34897 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHMT2P34897 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SHMT2P34897 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
SHMT2P34897 CASC19-228ENST00000641414 1684 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 AP002370.1-201ENST00000528055 1602 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 AL731556.1-201ENST00000394628 3711 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
SHMT2P34897 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHMT2P34897 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SHMT2P34897 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SHMT2P34897 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHMT2P34897 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHMT2P34897 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHMT2P34897 RNA5SP85-201ENST00000365378 119 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 MIR191-201ENST00000384873 92 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 RN7SKP146-201ENST00000410242 334 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 RN7SKP188-201ENST00000410789 317 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.36□□□□□ -1.39
SHMT2P34897 OR6R1P-201ENST00000431838 940 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 AL020997.1-201ENST00000446554 349 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 AL139156.3-201ENST00000454802 394 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.36□□□□□ -1.39
SHMT2P34897 AC099670.1-201ENST00000455141 783 ntBASIC6.36□□□□□ -1.39
SHMT2P34897 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SHMT2P34897 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.36□□□□□ -1.39
SHMT2P34897 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.36□□□□□ -1.39
SHMT2P34897 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.36□□□□□ -1.39
SHMT2P34897 IGLV3-6-201ENST00000523937 250 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms