Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.46□□□□□ -1.22
CCNA1P78396 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
CCNA1P78396 PSMC1P2-201ENST00000423961 1204 ntBASIC7.46□□□□□ -1.22
CCNA1P78396 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.46□□□□□ -1.22
CCNA1P78396 BX119917.1-201ENST00000432517 502 ntBASIC7.46□□□□□ -1.22
CCNA1P78396 PNKDP1-201ENST00000435914 430 ntBASIC7.46□□□□□ -1.22
CCNA1P78396 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.46□□□□□ -1.22
CCNA1P78396 DEFA11P-201ENST00000446470 261 ntBASIC7.46□□□□□ -1.22
CCNA1P78396 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.46□□□□□ -1.22
CCNA1P78396 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.46□□□□□ -1.22
CCNA1P78396 RBBP4P1-201ENST00000502424 1276 ntBASIC7.46□□□□□ -1.22
CCNA1P78396 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.46□□□□□ -1.22
CCNA1P78396 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.46□□□□□ -1.22
CCNA1P78396 IGLVIV-64-201ENST00000518581 301 ntBASIC7.46□□□□□ -1.22
CCNA1P78396 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.46□□□□□ -1.22
CCNA1P78396 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.46□□□□□ -1.22
CCNA1P78396 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.46□□□□□ -1.22
CCNA1P78396 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.46□□□□□ -1.22
CCNA1P78396 AL356986.1-201ENST00000604085 341 ntBASIC7.46□□□□□ -1.22
CCNA1P78396 AC108865.2-201ENST00000606881 432 ntBASIC7.46□□□□□ -1.22
CCNA1P78396 AC073389.3-201ENST00000609434 935 ntBASIC7.46□□□□□ -1.22
CCNA1P78396 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.46□□□□□ -1.22
CCNA1P78396 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.46□□□□□ -1.22
CCNA1P78396 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
CCNA1P78396 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.46□□□□□ -1.22
CCNA1P78396 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.46□□□□□ -1.22
CCNA1P78396 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCNA1P78396 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCNA1P78396 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.46□□□□□ -1.22
CCNA1P78396 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCNA1P78396 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCNA1P78396 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.46□□□□□ -1.22
CCNA1P78396 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.46□□□□□ -1.22
CCNA1P78396 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCNA1P78396 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.46□□□□□ -1.22
CCNA1P78396 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCNA1P78396 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.46□□□□□ -1.22
CCNA1P78396 CDY10P-201ENST00000452415 1567 ntBASIC7.46□□□□□ -1.22
CCNA1P78396 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.46□□□□□ -1.22
CCNA1P78396 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
CCNA1P78396 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.45□□□□□ -1.22
CCNA1P78396 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.45□□□□□ -1.22
CCNA1P78396 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCNA1P78396 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.45□□□□□ -1.22
CCNA1P78396 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.45□□□□□ -1.22
CCNA1P78396 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.45□□□□□ -1.22
CCNA1P78396 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCNA1P78396 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCNA1P78396 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.45□□□□□ -1.22
CCNA1P78396 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.45□□□□□ -1.22
CCNA1P78396 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.45□□□□□ -1.22
CCNA1P78396 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.45□□□□□ -1.22
CCNA1P78396 RPL12P30-201ENST00000488389 499 ntBASIC7.45□□□□□ -1.22
CCNA1P78396 LSM3P4-201ENST00000502948 309 ntBASIC7.45□□□□□ -1.22
CCNA1P78396 SNX18P24-201ENST00000505249 671 ntBASIC7.45□□□□□ -1.22
CCNA1P78396 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.45□□□□□ -1.22
CCNA1P78396 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.45□□□□□ -1.22
CCNA1P78396 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.45□□□□□ -1.22
CCNA1P78396 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.45□□□□□ -1.22
CCNA1P78396 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.45□□□□□ -1.22
CCNA1P78396 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.45□□□□□ -1.22
CCNA1P78396 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.45□□□□□ -1.22
CCNA1P78396 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCNA1P78396 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCNA1P78396 LYARP1-201ENST00000436977 1501 ntBASIC7.45□□□□□ -1.22
CCNA1P78396 AC007406.5-201ENST00000570140 3170 ntBASIC7.45□□□□□ -1.22
CCNA1P78396 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
CCNA1P78396 MTCO1P25-201ENST00000414449 1799 ntBASIC7.45□□□□□ -1.22
CCNA1P78396 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CCNA1P78396 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.45□□□□□ -1.22
CCNA1P78396 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.45□□□□□ -1.22
CCNA1P78396 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCNA1P78396 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCNA1P78396 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.45□□□□□ -1.22
CCNA1P78396 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC7.45□□□□□ -1.22
CCNA1P78396 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.45□□□□□ -1.22
CCNA1P78396 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCNA1P78396 AC083806.2-201ENST00000617795 2685 ntBASIC7.45□□□□□ -1.22
CCNA1P78396 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.44□□□□□ -1.22
CCNA1P78396 LPAL2-203ENST00000454031 2498 ntBASIC7.44□□□□□ -1.22
CCNA1P78396 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCNA1P78396 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
CCNA1P78396 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.44□□□□□ -1.22
CCNA1P78396 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.44□□□□□ -1.22
CCNA1P78396 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCNA1P78396 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
CCNA1P78396 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCNA1P78396 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CCNA1P78396 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.44□□□□□ -1.22
CCNA1P78396 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCNA1P78396 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCNA1P78396 RPL12P13-201ENST00000310055 497 ntBASIC7.44□□□□□ -1.22
CCNA1P78396 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.44□□□□□ -1.22
CCNA1P78396 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.44□□□□□ -1.22
CCNA1P78396 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.44□□□□□ -1.22
CCNA1P78396 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CCNA1P78396 AC097463.1-201ENST00000447288 481 ntBASIC7.44□□□□□ -1.22
CCNA1P78396 PPIAP20-201ENST00000449839 135 ntBASIC7.44□□□□□ -1.22
CCNA1P78396 AC117395.1-201ENST00000487390 403 ntBASIC7.44□□□□□ -1.22
CCNA1P78396 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms