Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
RXRBP28702 MIR130B-202ENST00000385018 82 ntBASIC8.89□□□□□ -0.99
RXRBP28702 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC8.89□□□□□ -0.99
RXRBP28702 AL603650.1-201ENST00000412680 240 ntBASIC8.89□□□□□ -0.99
RXRBP28702 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC8.89□□□□□ -0.99
RXRBP28702 EEF1B2P8-201ENST00000414101 671 ntBASIC8.89□□□□□ -0.99
RXRBP28702 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC8.89□□□□□ -0.99
RXRBP28702 DEFA9P-201ENST00000433042 285 ntBASIC8.89□□□□□ -0.99
RXRBP28702 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC8.89□□□□□ -0.99
RXRBP28702 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC8.89□□□□□ -0.99
RXRBP28702 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC8.89□□□□□ -0.99
RXRBP28702 AC011476.1-201ENST00000466725 307 ntBASIC8.89□□□□□ -0.99
RXRBP28702 RN7SL180P-201ENST00000466769 294 ntBASIC8.89□□□□□ -0.99
RXRBP28702 AC016550.1-201ENST00000505348 785 ntBASIC8.89□□□□□ -0.99
RXRBP28702 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC8.89□□□□□ -0.99
RXRBP28702 AC112191.2-201ENST00000522428 333 ntBASIC8.89□□□□□ -0.99
RXRBP28702 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC8.89□□□□□ -0.99
RXRBP28702 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC8.89□□□□□ -0.99
RXRBP28702 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC8.89□□□□□ -0.99
RXRBP28702 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.89□□□□□ -0.99
RXRBP28702 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 AC137695.2-201ENST00000603123 754 ntBASIC8.89□□□□□ -0.99
RXRBP28702 AP001033.2-201ENST00000609701 1003 ntBASIC8.89□□□□□ -0.99
RXRBP28702 SNORA16A-202ENST00000628458 135 ntBASIC8.89□□□□□ -0.99
RXRBP28702 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC8.89□□□□□ -0.99
RXRBP28702 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.89□□□□□ -0.99
RXRBP28702 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 AC027279.1-201ENST00000568885 4284 ntBASIC8.89□□□□□ -0.99
RXRBP28702 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
RXRBP28702 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
RXRBP28702 TMC3-AS1-206ENST00000612811 2726 ntBASIC8.89□□□□□ -0.99
RXRBP28702 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RXRBP28702 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC8.88□□□□□ -0.99
RXRBP28702 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RXRBP28702 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
RXRBP28702 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RXRBP28702 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RXRBP28702 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RXRBP28702 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.88□□□□□ -0.99
RXRBP28702 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RXRBP28702 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
RXRBP28702 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RXRBP28702 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
RXRBP28702 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
RXRBP28702 OR52B3P-201ENST00000314715 928 ntBASIC8.88□□□□□ -0.99
RXRBP28702 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
RXRBP28702 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC8.88□□□□□ -0.99
RXRBP28702 AC083862.1-201ENST00000427378 1242 ntBASIC8.88□□□□□ -0.99
RXRBP28702 AC112492.2-201ENST00000432774 1030 ntBASIC8.88□□□□□ -0.99
RXRBP28702 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC8.88□□□□□ -0.99
RXRBP28702 ZFAND6P1-201ENST00000434138 605 ntBASIC8.88□□□□□ -0.99
RXRBP28702 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC8.88□□□□□ -0.99
RXRBP28702 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC8.88□□□□□ -0.99
RXRBP28702 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC8.88□□□□□ -0.99
RXRBP28702 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RXRBP28702 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC8.88□□□□□ -0.99
RXRBP28702 ELOCP13-201ENST00000443934 329 ntBASIC8.88□□□□□ -0.99
RXRBP28702 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC8.88□□□□□ -0.99
RXRBP28702 AC092902.1-201ENST00000486999 259 ntBASIC8.88□□□□□ -0.99
RXRBP28702 PRELID3BP5-201ENST00000508612 460 ntBASIC8.88□□□□□ -0.99
RXRBP28702 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC8.88□□□□□ -0.99
RXRBP28702 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RXRBP28702 RNA5SP362-201ENST00000516048 118 ntBASIC8.88□□□□□ -0.99
RXRBP28702 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC8.88□□□□□ -0.99
RXRBP28702 AL162632.2-201ENST00000553933 399 ntBASIC8.88□□□□□ -0.99
RXRBP28702 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC8.88□□□□□ -0.99
RXRBP28702 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC8.88□□□□□ -0.99
RXRBP28702 AL049838.1-201ENST00000563647 981 ntBASIC8.88□□□□□ -0.99
RXRBP28702 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC8.88□□□□□ -0.99
RXRBP28702 AC004801.6-201ENST00000616571 978 ntBASIC8.88□□□□□ -0.99
RXRBP28702 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC8.88□□□□□ -0.99
RXRBP28702 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC8.88□□□□□ -0.99
RXRBP28702 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC8.88□□□□□ -0.99
RXRBP28702 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC8.88□□□□□ -0.99
RXRBP28702 IPO5-229ENST00000631030 192 ntTSL 5 BASIC8.88□□□□□ -0.99
RXRBP28702 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC8.88□□□□□ -0.99
RXRBP28702 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RXRBP28702 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
RXRBP28702 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC8.88□□□□□ -0.99
RXRBP28702 TPTE2P2-201ENST00000403471 1466 ntBASIC8.88□□□□□ -0.99
RXRBP28702 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RXRBP28702 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
RXRBP28702 AL353807.3-201ENST00000500626 2505 ntBASIC8.88□□□□□ -0.99
RXRBP28702 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RXRBP28702 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
RXRBP28702 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
RXRBP28702 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.87□□□□□ -0.99
RXRBP28702 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RXRBP28702 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC8.87□□□□□ -0.99
RXRBP28702 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
RXRBP28702 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
RXRBP28702 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
RXRBP28702 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms