Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AP002981.1-201ENST00000517692 975 ntBASIC7.71□□□□□ -1.18
HLA-DOAP06340 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.71□□□□□ -1.18
HLA-DOAP06340 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-DOAP06340 AL845552.1-201ENST00000556820 323 ntBASIC7.71□□□□□ -1.18
HLA-DOAP06340 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 AC134669.1-201ENST00000581275 672 ntBASIC7.71□□□□□ -1.18
HLA-DOAP06340 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 AC007620.3-201ENST00000608131 497 ntBASIC7.71□□□□□ -1.18
HLA-DOAP06340 AC104447.1-201ENST00000624214 2124 ntBASIC7.71□□□□□ -1.18
HLA-DOAP06340 TSHZ2-205ENST00000626626 670 ntBASIC7.71□□□□□ -1.18
HLA-DOAP06340 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-DOAP06340 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-DOAP06340 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-DOAP06340 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-DOAP06340 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-DOAP06340 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-DOAP06340 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-DOAP06340 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
HLA-DOAP06340 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.71□□□□□ -1.18
HLA-DOAP06340 CASC19-246ENST00000641625 1606 ntBASIC7.7□□□□□ -1.18
HLA-DOAP06340 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-DOAP06340 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-DOAP06340 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-DOAP06340 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 MFSD8-217ENST00000641178 4374 ntBASIC7.7□□□□□ -1.18
HLA-DOAP06340 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-DOAP06340 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-DOAP06340 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 RPL23AP85-201ENST00000421838 433 ntBASIC7.7□□□□□ -1.18
HLA-DOAP06340 AC108479.1-201ENST00000431142 427 ntBASIC7.7□□□□□ -1.18
HLA-DOAP06340 AC091390.2-201ENST00000432573 374 ntBASIC7.7□□□□□ -1.18
HLA-DOAP06340 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 EMC3-AS1-205ENST00000438698 534 ntBASIC7.7□□□□□ -1.18
HLA-DOAP06340 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 AC083906.1-201ENST00000509298 406 ntBASIC7.7□□□□□ -1.18
HLA-DOAP06340 AC108103.1-201ENST00000511286 446 ntBASIC7.7□□□□□ -1.18
HLA-DOAP06340 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 HSD3BP3-201ENST00000514706 994 ntBASIC7.7□□□□□ -1.18
HLA-DOAP06340 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 NPIPB14P-203ENST00000532298 987 ntBASIC7.7□□□□□ -1.18
HLA-DOAP06340 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 AC008055.1-201ENST00000547032 609 ntBASIC7.7□□□□□ -1.18
HLA-DOAP06340 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 MIR4502-201ENST00000580432 81 ntBASIC7.7□□□□□ -1.18
HLA-DOAP06340 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 AC024933.1-201ENST00000608472 348 ntBASIC7.7□□□□□ -1.18
HLA-DOAP06340 MIR6778-201ENST00000617912 73 ntBASIC7.7□□□□□ -1.18
HLA-DOAP06340 MIR8089-201ENST00000620165 82 ntBASIC7.7□□□□□ -1.18
HLA-DOAP06340 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-DOAP06340 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-DOAP06340 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-DOAP06340 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-DOAP06340 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-DOAP06340 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 CASC19-228ENST00000641414 1684 ntBASIC7.7□□□□□ -1.18
HLA-DOAP06340 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-DOAP06340 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-DOAP06340 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HLA-DOAP06340 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
HLA-DOAP06340 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-DOAP06340 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-DOAP06340 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-DOAP06340 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
HLA-DOAP06340 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 RNU1-46P-201ENST00000384425 164 ntBASIC7.69□□□□□ -1.18
HLA-DOAP06340 ZNF736P10Y-201ENST00000403990 1110 ntBASIC7.69□□□□□ -1.18
HLA-DOAP06340 SNORA11.3-201ENST00000408471 128 ntBASIC7.69□□□□□ -1.18
HLA-DOAP06340 RNA5SP431-201ENST00000410312 120 ntBASIC7.69□□□□□ -1.18
HLA-DOAP06340 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.69□□□□□ -1.18
HLA-DOAP06340 RN7SL254P-201ENST00000460609 284 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms