Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC9.43□□□□□ -0.9
HFM1A2PYH4 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
HFM1A2PYH4 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
HFM1A2PYH4 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC9.43□□□□□ -0.9
HFM1A2PYH4 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
HFM1A2PYH4 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
HFM1A2PYH4 AC105235.1-201ENST00000623208 1816 ntBASIC9.43□□□□□ -0.9
HFM1A2PYH4 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
HFM1A2PYH4 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
HFM1A2PYH4 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC9.43□□□□□ -0.9
HFM1A2PYH4 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
HFM1A2PYH4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
HFM1A2PYH4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
HFM1A2PYH4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
HFM1A2PYH4 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 RNA5SP435-201ENST00000364044 108 ntBASIC9.42□□□□□ -0.9
HFM1A2PYH4 AC069154.1-201ENST00000432914 542 ntBASIC9.42□□□□□ -0.9
HFM1A2PYH4 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 AC009237.1-201ENST00000442127 744 ntBASIC9.42□□□□□ -0.9
HFM1A2PYH4 OR2AF1P-201ENST00000454899 889 ntBASIC9.42□□□□□ -0.9
HFM1A2PYH4 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 RN7SL221P-201ENST00000466190 281 ntBASIC9.42□□□□□ -0.9
HFM1A2PYH4 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 KCTD9P4-201ENST00000526766 1166 ntBASIC9.42□□□□□ -0.9
HFM1A2PYH4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 MAPK10-371ENST00000641952 5209 ntBASIC9.42□□□□□ -0.9
HFM1A2PYH4 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
HFM1A2PYH4 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
HFM1A2PYH4 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC9.42□□□□□ -0.9
HFM1A2PYH4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
HFM1A2PYH4 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC9.41□□□□□ -0.9
HFM1A2PYH4 AC097463.1-201ENST00000447288 481 ntBASIC9.41□□□□□ -0.9
HFM1A2PYH4 HIGD1AP16-201ENST00000450986 258 ntBASIC9.41□□□□□ -0.9
HFM1A2PYH4 UGT2A3P7-201ENST00000510485 734 ntBASIC9.41□□□□□ -0.9
HFM1A2PYH4 AP004607.6-201ENST00000525033 1202 ntBASIC9.41□□□□□ -0.9
HFM1A2PYH4 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC9.41□□□□□ -0.9
HFM1A2PYH4 MIR4502-201ENST00000580432 81 ntBASIC9.41□□□□□ -0.9
HFM1A2PYH4 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
HFM1A2PYH4 HSPD1P4-201ENST00000547203 1702 ntBASIC9.41□□□□□ -0.9
HFM1A2PYH4 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC9.41□□□□□ -0.9
HFM1A2PYH4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
HFM1A2PYH4 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
HFM1A2PYH4 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
HFM1A2PYH4 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
HFM1A2PYH4 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC9.41□□□□□ -0.9
HFM1A2PYH4 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
HFM1A2PYH4 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HFM1A2PYH4 AC005522.1-201ENST00000395416 346 ntBASIC9.4□□□□□ -0.9
HFM1A2PYH4 CYP4F30P-202ENST00000420048 405 ntBASIC9.4□□□□□ -0.9
HFM1A2PYH4 VN1R38P-201ENST00000450265 887 ntBASIC9.4□□□□□ -0.9
HFM1A2PYH4 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC9.4□□□□□ -0.9
HFM1A2PYH4 AC095052.1-201ENST00000509955 863 ntBASIC9.4□□□□□ -0.9
HFM1A2PYH4 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC9.4□□□□□ -0.9
HFM1A2PYH4 AC073389.3-201ENST00000609434 935 ntBASIC9.4□□□□□ -0.9
HFM1A2PYH4 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC9.4□□□□□ -0.9
HFM1A2PYH4 OSTC-205ENST00000613215 876 ntTSL 2 BASIC9.4□□□□□ -0.9
HFM1A2PYH4 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC9.4□□□□□ -0.9
HFM1A2PYH4 BIN2P1-201ENST00000504996 1530 ntBASIC9.4□□□□□ -0.9
HFM1A2PYH4 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC9.4□□□□□ -0.9
HFM1A2PYH4 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HFM1A2PYH4 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
HFM1A2PYH4 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC9.4□□□□□ -0.9
HFM1A2PYH4 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC9.4□□□□□ -0.9
HFM1A2PYH4 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
HFM1A2PYH4 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC9.4□□□□□ -0.91
HFM1A2PYH4 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.91
HFM1A2PYH4 CYP2G2P-201ENST00000594920 1485 ntBASIC9.4□□□□□ -0.91
HFM1A2PYH4 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
HFM1A2PYH4 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
HFM1A2PYH4 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
HFM1A2PYH4 OR11H13P-201ENST00000359695 979 ntBASIC9.39□□□□□ -0.91
HFM1A2PYH4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 AL354707.3-201ENST00000427308 331 ntBASIC9.39□□□□□ -0.91
HFM1A2PYH4 DNAJA1P5-201ENST00000440278 943 ntBASIC9.39□□□□□ -0.91
HFM1A2PYH4 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 RNA5SP434-201ENST00000516647 121 ntBASIC9.39□□□□□ -0.91
HFM1A2PYH4 RPA2P3-201ENST00000533268 770 ntBASIC9.39□□□□□ -0.91
HFM1A2PYH4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 LAPTM4BP2-201ENST00000604542 446 ntBASIC9.39□□□□□ -0.91
HFM1A2PYH4 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC9.39□□□□□ -0.91
HFM1A2PYH4 AL132640.3-201ENST00000630473 177 ntBASIC9.39□□□□□ -0.91
HFM1A2PYH4 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HFM1A2PYH4 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
HFM1A2PYH4 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
HFM1A2PYH4 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms