Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL139254.2-202ENST00000641937 1156 ntBASIC9.05□□□□□ -0.96
LRCH3Q96II8 UTRN-203ENST00000367526 3220 ntTSL 5 BASIC9.05□□□□□ -0.96
LRCH3Q96II8 LINC00484-205ENST00000423719 3023 ntTSL 2 BASIC9.05□□□□□ -0.96
LRCH3Q96II8 ATP6V0D2-201ENST00000285393 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LRCH3Q96II8 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
LRCH3Q96II8 KIAA0391-205ENST00000603544 2232 ntTSL 5 BASIC9.05□□□□□ -0.96
LRCH3Q96II8 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
LRCH3Q96II8 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LRCH3Q96II8 BCL9P1-201ENST00000506012 2561 ntBASIC9.05□□□□□ -0.96
LRCH3Q96II8 LDB2-202ENST00000441778 2476 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
LRCH3Q96II8 NBPF19-203ENST00000578189 5034 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LRCH3Q96II8 FAM193A-210ENST00000545951 3987 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
LRCH3Q96II8 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC9.05□□□□□ -0.96
LRCH3Q96II8 SAYSD1-202ENST00000373249 1972 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 MTRR-201ENST00000264668 3274 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 TNS1-202ENST00000310858 1792 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 TNRC6C-AS1-201ENST00000589217 3192 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 PEX5L-209ENST00000468741 2309 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 AC104619.3-201ENST00000509116 1387 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 Y_RNA.18-201ENST00000362461 102 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 RN7SKP30-201ENST00000411373 334 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 FABP5P1-201ENST00000423401 411 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 YAP1P2-201ENST00000455104 610 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 RPLP0P1-201ENST00000457002 361 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 RN7SL836P-201ENST00000476140 296 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 CCDC34P1-201ENST00000507441 517 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 AC008632.1-201ENST00000519400 753 ntTSL 3 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 AC013701.1-201ENST00000522657 465 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 AK6P1-201ENST00000540219 478 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 PDCD5P1-201ENST00000543528 309 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 AC125421.2-201ENST00000580370 583 ntTSL 4 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 MIR548AB-201ENST00000584917 84 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 AP001017.1-201ENST00000591378 482 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 MIR7162-201ENST00000611134 69 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 MIR8082-201ENST00000612488 81 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 MIR6070-201ENST00000613967 103 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 PART1_3.1-201ENST00000619680 131 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 ADD2-204ENST00000407644 3741 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 AC004491.1-201ENST00000623029 1882 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 AC132825.3-201ENST00000562182 4710 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC9.04□□□□□ -0.96
LRCH3Q96II8 ECD-203ENST00000430082 2246 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LRCH3Q96II8 AL591222.1-201ENST00000568063 3844 ntBASIC9.04□□□□□ -0.96
LRCH3Q96II8 TOX4-212ENST00000613569 4711 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 RSU1-203ENST00000377921 3919 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 DSG4-201ENST00000308128 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 IST1-226ENST00000606369 3583 ntTSL 2 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 RCAN1-203ENST00000381135 2526 ntTSL 2 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 FOLH1B-201ENST00000525540 1974 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 ZP2-204ENST00000574091 2241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 CALML3-AS1-202ENST00000543008 4531 ntTSL 5 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 FBXL13-202ENST00000379305 2478 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 FAM74A4-203ENST00000621724 1862 ntTSL 2 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 FAM196A-202ENST00000522781 4403 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LRCH3Q96II8 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC9.03□□□□□ -0.96
LRCH3Q96II8 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms