Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CCNA1P78396 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CCNA1P78396 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CCNA1P78396 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
CCNA1P78396 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CCNA1P78396 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.48□□□□□ -1.21
CCNA1P78396 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC7.48□□□□□ -1.21
CCNA1P78396 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CCNA1P78396 CXCR2P1-202ENST00000443392 1074 ntBASIC7.48□□□□□ -1.21
CCNA1P78396 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CCNA1P78396 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CCNA1P78396 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.48□□□□□ -1.21
CCNA1P78396 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.48□□□□□ -1.21
CCNA1P78396 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.48□□□□□ -1.21
CCNA1P78396 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.48□□□□□ -1.21
CCNA1P78396 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
CCNA1P78396 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.48□□□□□ -1.21
CCNA1P78396 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCNA1P78396 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCNA1P78396 GLYATL1P2-202ENST00000588046 902 ntBASIC7.48□□□□□ -1.21
CCNA1P78396 AC067773.1-201ENST00000603284 1094 ntBASIC7.48□□□□□ -1.21
CCNA1P78396 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.48□□□□□ -1.21
CCNA1P78396 MIR6862-1-201ENST00000613016 70 ntBASIC7.48□□□□□ -1.21
CCNA1P78396 MIR6862-2-201ENST00000614755 70 ntBASIC7.48□□□□□ -1.21
CCNA1P78396 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.48□□□□□ -1.21
CCNA1P78396 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.48□□□□□ -1.21
CCNA1P78396 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.48□□□□□ -1.21
CCNA1P78396 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.48□□□□□ -1.21
CCNA1P78396 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
CCNA1P78396 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.48□□□□□ -1.21
CCNA1P78396 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.48□□□□□ -1.21
CCNA1P78396 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCNA1P78396 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CCNA1P78396 TATDN2P3-201ENST00000452855 3665 ntBASIC7.48□□□□□ -1.21
CCNA1P78396 AC023245.2-201ENST00000530760 2978 ntBASIC7.47□□□□□ -1.21
CCNA1P78396 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCNA1P78396 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.47□□□□□ -1.21
CCNA1P78396 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CCNA1P78396 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCNA1P78396 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCNA1P78396 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCNA1P78396 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCNA1P78396 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CCNA1P78396 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
CCNA1P78396 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CCNA1P78396 RPL5P5-201ENST00000392009 893 ntBASIC7.47□□□□□ -1.21
CCNA1P78396 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.47□□□□□ -1.21
CCNA1P78396 DHFRP2-201ENST00000414224 547 ntBASIC7.47□□□□□ -1.21
CCNA1P78396 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.47□□□□□ -1.21
CCNA1P78396 RPL5P34-201ENST00000426545 891 ntBASIC7.47□□□□□ -1.21
CCNA1P78396 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCNA1P78396 RPS29P14-201ENST00000431518 171 ntBASIC7.47□□□□□ -1.21
CCNA1P78396 IGLV3-4-201ENST00000432300 244 ntBASIC7.47□□□□□ -1.21
CCNA1P78396 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.47□□□□□ -1.21
CCNA1P78396 CDK7P1-201ENST00000434574 693 ntBASIC7.47□□□□□ -1.21
CCNA1P78396 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.47□□□□□ -1.21
CCNA1P78396 RPL6P30-201ENST00000443382 862 ntBASIC7.47□□□□□ -1.21
CCNA1P78396 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.47□□□□□ -1.21
CCNA1P78396 RPL5P9-201ENST00000448118 886 ntBASIC7.47□□□□□ -1.21
CCNA1P78396 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.47□□□□□ -1.21
CCNA1P78396 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.47□□□□□ -1.21
CCNA1P78396 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.47□□□□□ -1.21
CCNA1P78396 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.47□□□□□ -1.21
CCNA1P78396 AC090826.1-203ENST00000569235 490 ntBASIC7.47□□□□□ -1.21
CCNA1P78396 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.47□□□□□ -1.21
CCNA1P78396 AL096712.1-201ENST00000614561 159 ntBASIC7.47□□□□□ -1.21
CCNA1P78396 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.47□□□□□ -1.21
CCNA1P78396 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCNA1P78396 AC116631.1-202ENST00000640984 683 ntBASIC7.47□□□□□ -1.21
CCNA1P78396 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCNA1P78396 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCNA1P78396 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCNA1P78396 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CCNA1P78396 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CCNA1P78396 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CCNA1P78396 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.47□□□□□ -1.21
CCNA1P78396 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
CCNA1P78396 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.47□□□□□ -1.21
CCNA1P78396 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCNA1P78396 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCNA1P78396 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.47□□□□□ -1.21
CCNA1P78396 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.47□□□□□ -1.21
CCNA1P78396 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CCNA1P78396 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
CCNA1P78396 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CCNA1P78396 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
CCNA1P78396 AC093278.2-201ENST00000564956 2485 ntBASIC7.46□□□□□ -1.21
CCNA1P78396 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
CCNA1P78396 UGT2B25P-201ENST00000511504 1586 ntBASIC7.46□□□□□ -1.21
CCNA1P78396 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.46□□□□□ -1.21
CCNA1P78396 HSPD1P9-201ENST00000420325 1636 ntBASIC7.46□□□□□ -1.21
CCNA1P78396 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CCNA1P78396 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.46□□□□□ -1.22
CCNA1P78396 NBPF8-201ENST00000583271 5330 ntBASIC7.46□□□□□ -1.22
CCNA1P78396 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
CCNA1P78396 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CCNA1P78396 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCNA1P78396 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CCNA1P78396 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CCNA1P78396 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms