Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC8.22□□□□□ -1.09
COL15A1P39059 AC027243.2-201ENST00000602530 724 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 AC119501.1-201ENST00000603646 475 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC8.22□□□□□ -1.09
COL15A1P39059 AP000894.4-201ENST00000610185 483 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC8.22□□□□□ -1.09
COL15A1P39059 AC004801.6-201ENST00000616571 978 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC8.22□□□□□ -1.09
COL15A1P39059 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC8.22□□□□□ -1.09
COL15A1P39059 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
COL15A1P39059 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
COL15A1P39059 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
COL15A1P39059 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
COL15A1P39059 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
COL15A1P39059 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.22□□□□□ -1.09
COL15A1P39059 AL354854.1-201ENST00000455940 1363 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
COL15A1P39059 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
COL15A1P39059 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
COL15A1P39059 NPL-212ENST00000614468 2376 ntTSL 5 BASIC8.22□□□□□ -1.09
COL15A1P39059 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
COL15A1P39059 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
COL15A1P39059 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
COL15A1P39059 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
COL15A1P39059 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
COL15A1P39059 TATDN2P3-201ENST00000452855 3665 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC8.22□□□□□ -1.09
COL15A1P39059 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
COL15A1P39059 AC105114.1-201ENST00000624795 1862 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
COL15A1P39059 AL590004.3-202ENST00000445883 451 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC8.22□□□□□ -1.09
COL15A1P39059 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC8.22□□□□□ -1.09
COL15A1P39059 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
COL15A1P39059 RN7SL369P-201ENST00000477138 299 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 RN7SL104P-201ENST00000498686 293 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC8.22□□□□□ -1.09
COL15A1P39059 AC079905.1-201ENST00000549280 475 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.22□□□□□ -1.09
COL15A1P39059 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
COL15A1P39059 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC8.22□□□□□ -1.09
COL15A1P39059 TEX41-218ENST00000596540 882 ntTSL 5 BASIC8.22□□□□□ -1.09
COL15A1P39059 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC8.22□□□□□ -1.09
COL15A1P39059 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC8.22□□□□□ -1.09
COL15A1P39059 FO681491.1-202ENST00000623392 737 ntBASIC8.22□□□□□ -1.09
COL15A1P39059 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC8.22□□□□□ -1.09
COL15A1P39059 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC8.22□□□□□ -1.09
COL15A1P39059 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
COL15A1P39059 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
COL15A1P39059 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.21□□□□□ -1.09
COL15A1P39059 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.21□□□□□ -1.09
COL15A1P39059 MAPK10-344ENST00000641718 3746 ntBASIC8.21□□□□□ -1.09
COL15A1P39059 AL133243.4-201ENST00000623116 3109 ntBASIC8.21□□□□□ -1.09
COL15A1P39059 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
COL15A1P39059 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
COL15A1P39059 LPAL2-203ENST00000454031 2498 ntBASIC8.21□□□□□ -1.09
COL15A1P39059 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
COL15A1P39059 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
COL15A1P39059 AC023245.2-201ENST00000530760 2978 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
COL15A1P39059 AC127070.3-201ENST00000503695 3263 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
COL15A1P39059 AC027575.3-201ENST00000583058 2747 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC8.21□□□□□ -1.1
COL15A1P39059 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
COL15A1P39059 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
COL15A1P39059 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
COL15A1P39059 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
COL15A1P39059 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
COL15A1P39059 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC8.21□□□□□ -1.1
COL15A1P39059 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC8.21□□□□□ -1.1
COL15A1P39059 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
COL15A1P39059 RBMY2AP-201ENST00000445405 1157 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 RBMY2CP-201ENST00000448575 1157 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 RBMY2DP-202ENST00000448881 1157 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 RBMY2BP-202ENST00000451071 1156 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC8.21□□□□□ -1.1
COL15A1P39059 AC093719.1-201ENST00000480427 441 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 AC022415.1-202ENST00000486612 523 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 RN7SL101P-201ENST00000496350 279 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 AC060775.1-201ENST00000518241 520 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC8.21□□□□□ -1.1
COL15A1P39059 IGHV3-57-201ENST00000520143 280 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 SCARNA9-201ENST00000530422 353 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC8.21□□□□□ -1.1
COL15A1P39059 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC8.21□□□□□ -1.1
COL15A1P39059 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC8.21□□□□□ -1.1
COL15A1P39059 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC8.21□□□□□ -1.1
COL15A1P39059 BUB1P1-201ENST00000603541 607 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 AL359704.2-201ENST00000604335 521 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 AC025171.4-201ENST00000607250 1047 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 FAM27E2-201ENST00000619668 403 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC8.21□□□□□ -1.1
COL15A1P39059 AC012653.2-201ENST00000621880 420 ntBASIC8.21□□□□□ -1.1
COL15A1P39059 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC8.21□□□□□ -1.1
COL15A1P39059 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
COL15A1P39059 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC8.2□□□□□ -1.1
COL15A1P39059 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
COL15A1P39059 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
COL15A1P39059 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms