Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CPS1P31327 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC9.04□□□□□ -0.96
CPS1P31327 DYNC1I2P1-201ENST00000435916 1838 ntBASIC9.04□□□□□ -0.96
CPS1P31327 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CPS1P31327 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
CPS1P31327 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC9.04□□□□□ -0.96
CPS1P31327 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CPS1P31327 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
CPS1P31327 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
CPS1P31327 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CPS1P31327 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CPS1P31327 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CPS1P31327 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CPS1P31327 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC9.04□□□□□ -0.96
CPS1P31327 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC9.04□□□□□ -0.96
CPS1P31327 RNU6-171P-201ENST00000384354 107 ntBASIC9.04□□□□□ -0.96
CPS1P31327 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
CPS1P31327 OR2AT2P-201ENST00000413438 905 ntBASIC9.04□□□□□ -0.96
CPS1P31327 AL035660.1-201ENST00000422041 222 ntBASIC9.04□□□□□ -0.96
CPS1P31327 BX119321.1-201ENST00000428912 797 ntBASIC9.04□□□□□ -0.96
CPS1P31327 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC9.04□□□□□ -0.96
CPS1P31327 FTH1P2-201ENST00000466086 412 ntBASIC9.04□□□□□ -0.96
CPS1P31327 CR383658.1-201ENST00000514609 734 ntBASIC9.04□□□□□ -0.96
CPS1P31327 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC9.04□□□□□ -0.96
CPS1P31327 AC091078.2-201ENST00000557145 559 ntBASIC9.04□□□□□ -0.96
CPS1P31327 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC9.04□□□□□ -0.96
CPS1P31327 AL035661.1-201ENST00000620459 1144 ntBASIC9.04□□□□□ -0.96
CPS1P31327 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
CPS1P31327 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CPS1P31327 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CPS1P31327 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC9.04□□□□□ -0.96
CPS1P31327 AC027279.4-201ENST00000624371 2072 ntBASIC9.04□□□□□ -0.96
CPS1P31327 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC9.04□□□□□ -0.96
CPS1P31327 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CPS1P31327 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
CPS1P31327 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC9.04□□□□□ -0.96
CPS1P31327 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CPS1P31327 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
CPS1P31327 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
CPS1P31327 AL353743.3-201ENST00000442109 1468 ntBASIC9.03□□□□□ -0.96
CPS1P31327 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CPS1P31327 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
CPS1P31327 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
CPS1P31327 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CPS1P31327 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
CPS1P31327 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
CPS1P31327 FABP12P1-201ENST00000401911 322 ntBASIC9.03□□□□□ -0.96
CPS1P31327 RN7SKP121-201ENST00000410842 305 ntBASIC9.03□□□□□ -0.96
CPS1P31327 NPM1P4-201ENST00000414095 812 ntBASIC9.03□□□□□ -0.96
CPS1P31327 CYCSP52-201ENST00000422857 310 ntBASIC9.03□□□□□ -0.96
CPS1P31327 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CPS1P31327 AL512637.1-201ENST00000439523 1231 ntBASIC9.03□□□□□ -0.96
CPS1P31327 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC9.03□□□□□ -0.96
CPS1P31327 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CPS1P31327 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC9.03□□□□□ -0.96
CPS1P31327 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC9.03□□□□□ -0.96
CPS1P31327 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC9.03□□□□□ -0.96
CPS1P31327 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC9.03□□□□□ -0.96
CPS1P31327 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CPS1P31327 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
CPS1P31327 AC235565.1-201ENST00000456962 1325 ntBASIC9.03□□□□□ -0.96
CPS1P31327 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
CPS1P31327 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC9.03□□□□□ -0.96
CPS1P31327 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC9.03□□□□□ -0.96
CPS1P31327 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
CPS1P31327 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CPS1P31327 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
CPS1P31327 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
CPS1P31327 AC073065.1-201ENST00000411678 2866 ntBASIC9.02□□□□□ -0.96
CPS1P31327 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
CPS1P31327 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
CPS1P31327 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
CPS1P31327 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC9.02□□□□□ -0.96
CPS1P31327 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
CPS1P31327 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
CPS1P31327 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC9.02□□□□□ -0.97
CPS1P31327 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CPS1P31327 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC9.02□□□□□ -0.97
CPS1P31327 OR3D1P-201ENST00000438288 955 ntBASIC9.02□□□□□ -0.97
CPS1P31327 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC9.02□□□□□ -0.97
CPS1P31327 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CPS1P31327 IMMP1LP3-201ENST00000604197 224 ntBASIC9.02□□□□□ -0.97
CPS1P31327 MRPL57P1-201ENST00000621486 265 ntBASIC9.02□□□□□ -0.97
CPS1P31327 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CPS1P31327 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CPS1P31327 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC9.02□□□□□ -0.97
CPS1P31327 AC009237.3-203ENST00000442128 3551 ntBASIC9.02□□□□□ -0.97
CPS1P31327 AL133243.2-201ENST00000610331 1621 ntBASIC9.02□□□□□ -0.97
CPS1P31327 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CPS1P31327 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
CPS1P31327 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
CPS1P31327 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CPS1P31327 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
CPS1P31327 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
CPS1P31327 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CPS1P31327 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
CPS1P31327 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC9.01□□□□□ -0.97
CPS1P31327 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
CPS1P31327 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
CPS1P31327 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms