Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RB1P06400 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RB1P06400 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RB1P06400 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RB1P06400 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RB1P06400 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RB1P06400 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.05□□□□□ -1.28
RB1P06400 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.05□□□□□ -1.28
RB1P06400 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
RB1P06400 SALL4P7-201ENST00000555779 3120 ntBASIC7.05□□□□□ -1.28
RB1P06400 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.05□□□□□ -1.28
RB1P06400 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RB1P06400 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.05□□□□□ -1.28
RB1P06400 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.05□□□□□ -1.28
RB1P06400 AC002127.1-201ENST00000421305 225 ntBASIC7.05□□□□□ -1.28
RB1P06400 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.05□□□□□ -1.28
RB1P06400 OSTCP4-201ENST00000424397 449 ntBASIC7.05□□□□□ -1.28
RB1P06400 RPL12P16-201ENST00000431098 498 ntBASIC7.05□□□□□ -1.28
RB1P06400 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.05□□□□□ -1.28
RB1P06400 PNKDP1-201ENST00000435914 430 ntBASIC7.05□□□□□ -1.28
RB1P06400 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC7.05□□□□□ -1.28
RB1P06400 CEACAMP5-201ENST00000448037 961 ntBASIC7.05□□□□□ -1.28
RB1P06400 AC068228.1-201ENST00000461723 211 ntBASIC7.05□□□□□ -1.28
RB1P06400 RPS14P8-201ENST00000478778 369 ntBASIC7.05□□□□□ -1.28
RB1P06400 RPL19P11-201ENST00000495944 589 ntBASIC7.05□□□□□ -1.28
RB1P06400 AC104109.1-201ENST00000498563 436 ntBASIC7.05□□□□□ -1.28
RB1P06400 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.05□□□□□ -1.28
RB1P06400 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.05□□□□□ -1.28
RB1P06400 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.05□□□□□ -1.28
RB1P06400 AL133399.1-201ENST00000527476 298 ntBASIC7.05□□□□□ -1.28
RB1P06400 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.05□□□□□ -1.28
RB1P06400 AL162632.2-201ENST00000553933 399 ntBASIC7.05□□□□□ -1.28
RB1P06400 RN7SL404P-201ENST00000582421 281 ntBASIC7.05□□□□□ -1.28
RB1P06400 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.05□□□□□ -1.28
RB1P06400 GLYATL1P2-202ENST00000588046 902 ntBASIC7.05□□□□□ -1.28
RB1P06400 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.05□□□□□ -1.28
RB1P06400 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.05□□□□□ -1.28
RB1P06400 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.05□□□□□ -1.28
RB1P06400 SNORA74.4-201ENST00000607595 199 ntBASIC7.05□□□□□ -1.28
RB1P06400 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.05□□□□□ -1.28
RB1P06400 AL354950.1-201ENST00000614150 568 ntBASIC7.05□□□□□ -1.28
RB1P06400 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RB1P06400 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
RB1P06400 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.05□□□□□ -1.28
RB1P06400 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RB1P06400 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.05□□□□□ -1.28
RB1P06400 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RB1P06400 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.05□□□□□ -1.28
RB1P06400 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RB1P06400 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.05□□□□□ -1.28
RB1P06400 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
RB1P06400 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RB1P06400 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.05□□□□□ -1.28
RB1P06400 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
RB1P06400 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RB1P06400 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.05□□□□□ -1.28
RB1P06400 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.04□□□□□ -1.28
RB1P06400 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.04□□□□□ -1.28
RB1P06400 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.04□□□□□ -1.28
RB1P06400 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
RB1P06400 AC073342.2-201ENST00000595842 1800 ntBASIC7.04□□□□□ -1.28
RB1P06400 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.04□□□□□ -1.28
RB1P06400 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.04□□□□□ -1.28
RB1P06400 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.04□□□□□ -1.28
RB1P06400 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 AC023490.2-201ENST00000359859 470 ntBASIC7.04□□□□□ -1.28
RB1P06400 AC244452.1-201ENST00000413798 141 ntBASIC7.04□□□□□ -1.28
RB1P06400 NAP1L4P3-201ENST00000432820 1147 ntBASIC7.04□□□□□ -1.28
RB1P06400 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.04□□□□□ -1.28
RB1P06400 RBMY3AP-201ENST00000449381 1145 ntBASIC7.04□□□□□ -1.28
RB1P06400 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.04□□□□□ -1.28
RB1P06400 RN7SL214P-201ENST00000487317 265 ntBASIC7.04□□□□□ -1.28
RB1P06400 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.04□□□□□ -1.28
RB1P06400 RNA5SP418-201ENST00000515951 117 ntBASIC7.04□□□□□ -1.28
RB1P06400 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.04□□□□□ -1.28
RB1P06400 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.04□□□□□ -1.28
RB1P06400 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.04□□□□□ -1.28
RB1P06400 AC087575.1-201ENST00000585087 229 ntBASIC7.04□□□□□ -1.28
RB1P06400 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.04□□□□□ -1.28
RB1P06400 AC087821.1-201ENST00000623639 567 ntBASIC7.04□□□□□ -1.28
RB1P06400 AC130448.2-201ENST00000624082 374 ntBASIC7.04□□□□□ -1.28
RB1P06400 AC073488.6-201ENST00000632293 754 ntBASIC7.04□□□□□ -1.28
RB1P06400 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 DDX43P1-201ENST00000510713 1763 ntBASIC7.04□□□□□ -1.28
RB1P06400 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
RB1P06400 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RB1P06400 ABCA11P-202ENST00000504019 2110 ntBASIC7.04□□□□□ -1.28
RB1P06400 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms