Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 AL021368.3-201ENST00000607119 578 ntBASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 AL080250.1-202ENST00000607221 915 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 AC116165.3-201ENST00000614524 400 ntBASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 AC090099.1-204ENST00000623626 849 ntBASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 AC087894.3-201ENST00000623682 349 ntBASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 AC073263.3-201ENST00000624449 858 ntBASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 AL049634.1-201ENST00000453770 1720 ntBASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 KYNUP3-201ENST00000574386 1341 ntBASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 ZNF806-201ENST00000438300 1774 ntBASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SMIM3Q9BZL3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 RNU1-21P-201ENST00000363327 163 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 RNA5SP35-201ENST00000391257 129 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 RPL7-203ENST00000396466 762 ntTSL 3 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AL390879.1-201ENST00000439143 386 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 RPL5P10-201ENST00000445207 894 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 PFN1P11-201ENST00000445829 389 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 RPL7AP23-201ENST00000482625 776 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 LINC02162-201ENST00000512521 574 ntTSL 4 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AP001803.1-201ENST00000525668 147 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 OR5M4P-201ENST00000529436 925 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 OR7E161P-201ENST00000533722 967 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AL590032.1-201ENST00000604920 252 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AL136139.1-201ENST00000605568 222 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AC093388.1-201ENST00000609166 430 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 MIR6751-201ENST00000610479 63 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 C18orf12-201ENST00000623329 537 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AC002094.5-201ENST00000623773 629 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AL356585.10-201ENST00000641883 123 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AL022311.1-201ENST00000623726 19416 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 AC025470.1-201ENST00000510053 2032 ntBASIC5.18□□□□□ -1.58
SMIM3Q9BZL3 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 U3.1-201ENST00000362500 215 ntBASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 MIR197-201ENST00000384976 75 ntBASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SMIM3Q9BZL3 RNA5SP474-201ENST00000391234 90 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms