Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 MTND5P12-201ENST00000502851 1449 ntBASIC6.93□□□□□ -1.3
ATG4DQ86TL0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.93□□□□□ -1.3
ATG4DQ86TL0 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC090132.1-201ENST00000524071 1480 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC010886.1-201ENST00000437380 2869 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 Y_RNA.41-201ENST00000362646 102 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 RNU1-122P-201ENST00000365538 156 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 Y_RNA.390-201ENST00000383932 102 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 U3.31-201ENST00000408113 216 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 RNU2-5P-201ENST00000410533 180 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 RPL23AP18-201ENST00000416139 468 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 CRIP1P3-201ENST00000416794 220 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 RAC1P4-201ENST00000419413 579 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 RPE-205ENST00000429907 925 ntTSL 2 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 VN1R54P-201ENST00000435210 1049 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 MTCO1P19-201ENST00000443487 500 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 FO393419.1-201ENST00000443746 355 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 MTCO1P48-201ENST00000448024 1096 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AL589880.1-201ENST00000448271 287 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC092570.2-201ENST00000452117 1143 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC092001.1-201ENST00000453012 261 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC092691.2-201ENST00000461787 803 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 MTCO3P38-201ENST00000468910 766 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 RN7SL445P-201ENST00000495609 293 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC108120.1-201ENST00000506543 991 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC095052.1-201ENST00000509955 863 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 GAPDHP71-201ENST00000511530 1003 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 RNU6-491P-201ENST00000516099 110 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 RNU6-528P-201ENST00000516926 100 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC130364.2-201ENST00000528639 604 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 RAB11AP2-201ENST00000545905 639 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 RPS3AP4-201ENST00000555161 764 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 RN7SL237P-201ENST00000580912 287 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 BOLA2P1-201ENST00000584794 232 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 BNIP3P33-201ENST00000598912 569 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC073544.2-201ENST00000601155 540 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 OR7A1P-201ENST00000601206 970 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AL133247.2-201ENST00000603236 482 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 MTND3P19-201ENST00000603825 345 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC122133.1-201ENST00000613964 233 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AL136981.2-201ENST00000617319 734 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC091059.2-201ENST00000623355 614 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 CASC19-280ENST00000642102 1351 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 MARK2P10-201ENST00000454959 1437 ntBASIC6.92□□□□□ -1.3
ATG4DQ86TL0 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC6.92□□□□□ -1.3
ATG4DQ86TL0 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.91□□□□□ -1.3
ATG4DQ86TL0 HCG18-244ENST00000602516 2890 ntBASIC6.91□□□□□ -1.3
ATG4DQ86TL0 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ATG4DQ86TL0 AC011815.2-201ENST00000618230 2021 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms