Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 TPT1P7-201ENST00000458300 517 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 RN7SL563P-201ENST00000481233 298 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 PDCL3P4-201ENST00000489621 720 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 RN7SL135P-201ENST00000490144 278 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 RPL17P37-201ENST00000490729 548 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AC096751.1-202ENST00000502691 1067 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AC008885.2-201ENST00000509506 930 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AC010285.3-201ENST00000511668 676 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 RN7SKP197-201ENST00000517077 297 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 IGHVII-30-1-201ENST00000522218 301 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 MED28P5-201ENST00000528254 438 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AC079171.1-201ENST00000568788 914 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 TUBAP4-201ENST00000569261 416 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 RBM22P1-201ENST00000578589 1214 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AC010385.2-201ENST00000603743 490 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AC079880.2-201ENST00000603790 1213 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AL356052.1-201ENST00000605764 376 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AC009994.1-201ENST00000606889 253 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AL138478.1-201ENST00000612252 832 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AC138904.2-201ENST00000614412 107 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AL136038.5-201ENST00000620835 554 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AL133243.2-201ENST00000610331 1621 ntBASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.21□□□□□ -1.1
FOXR1Q6PIV2 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 SLC2A3P2-201ENST00000331747 1480 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 LINC00955-202ENST00000514422 1502 ntTSL 4 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 RNU5B-1-201ENST00000363286 116 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 SNORD116.1-201ENST00000365628 92 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 CST11-201ENST00000377007 461 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 SNORA30-201ENST00000384028 129 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 CAV1-204ENST00000393470 598 ntTSL 4 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 VDAC2P1-201ENST00000399358 958 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 RFKP1-201ENST00000400940 428 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 RN7SKP142-201ENST00000411236 328 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 PROX1-AS1-201ENST00000413560 496 ntTSL 5 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 NPM1P4-201ENST00000414095 812 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 RNF19BPX-201ENST00000426224 625 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 RPS26P4-201ENST00000431743 355 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 USP12PX-201ENST00000432383 1057 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 AL445686.1-201ENST00000443086 348 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 AL135929.1-201ENST00000449287 552 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 MRPL42P4-201ENST00000453267 443 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 CFTRP1-201ENST00000456646 183 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 AC079203.1-201ENST00000487972 404 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 RNU6-1153P-201ENST00000516760 105 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 OR5AM1P-201ENST00000532136 1032 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 OR5AL2P-201ENST00000532185 920 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 NOP56P3-201ENST00000549457 385 ntBASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC8.2□□□□□ -1.1
FOXR1Q6PIV2 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms