Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 KCNMB3P1-202ENST00000493696 3389 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AC107977.1-201ENST00000355745 939 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 RNU6-1331P-201ENST00000363658 106 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 ZBTB8OSP2-201ENST00000423890 504 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AC114402.2-201ENST00000432760 643 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 HMGN1P32-201ENST00000441744 256 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 Z99714.1-201ENST00000450463 807 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 RPS14P7-201ENST00000473701 448 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 RN7SL655P-201ENST00000486087 298 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 OR5F2P-201ENST00000532761 941 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AC074029.2-201ENST00000551045 634 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 MIR4428-201ENST00000584884 73 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 BNIP3P24-201ENST00000593398 557 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AC013444.2-201ENST00000603317 787 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AC074276.2-201ENST00000619891 348 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AC005753.1-201ENST00000623837 618 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AC068137.4-201ENST00000638485 296 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 AC004023.1-201ENST00000561473 1744 ntBASIC8.09□□□□□ -1.11
CHMP4BP1P59074 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CHMP4BP1P59074 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
CHMP4BP1P59074 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AL133320.1-201ENST00000621423 2352 ntBASIC8.08□□□□□ -1.12
CHMP4BP1P59074 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AC079178.2-201ENST00000439323 1624 ntBASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AC139426.3-201ENST00000605648 2059 ntBASIC8.08□□□□□ -1.12
CHMP4BP1P59074 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 RNA5SP114-201ENST00000363780 113 ntBASIC8.08□□□□□ -1.12
CHMP4BP1P59074 RNA5SP472-201ENST00000363868 119 ntBASIC8.08□□□□□ -1.12
CHMP4BP1P59074 SNORA68-201ENST00000384437 133 ntBASIC8.08□□□□□ -1.12
CHMP4BP1P59074 RNU6-1257P-201ENST00000384625 110 ntBASIC8.08□□□□□ -1.12
CHMP4BP1P59074 RNA5SP280-201ENST00000411230 115 ntBASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AL512637.2-201ENST00000431287 1256 ntBASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 DEFA11P-201ENST00000446470 261 ntBASIC8.08□□□□□ -1.12
CHMP4BP1P59074 CEACAMP11-201ENST00000455211 583 ntBASIC8.08□□□□□ -1.12
CHMP4BP1P59074 MED28P7-201ENST00000456611 530 ntBASIC8.08□□□□□ -1.12
CHMP4BP1P59074 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AC005412.2-201ENST00000492004 341 ntBASIC8.08□□□□□ -1.12
CHMP4BP1P59074 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AC104115.2-201ENST00000523026 687 ntBASIC8.08□□□□□ -1.12
CHMP4BP1P59074 SOX5P1-201ENST00000524155 1127 ntBASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AP001803.1-201ENST00000525668 147 ntBASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC8.08□□□□□ -1.12
CHMP4BP1P59074 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms