Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX4O60224 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
SSX4O60224 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SSX4O60224 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SSX4O60224 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX4O60224 OR2M1P-201ENST00000318104 951 ntBASIC6.08□□□□□ -1.44
SSX4O60224 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.08□□□□□ -1.44
SSX4O60224 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SSX4O60224 LDHAP5-201ENST00000394996 622 ntBASIC6.08□□□□□ -1.44
SSX4O60224 MIR541-201ENST00000401360 84 ntBASIC6.08□□□□□ -1.44
SSX4O60224 RN7SKP148-201ENST00000410179 275 ntBASIC6.08□□□□□ -1.44
SSX4O60224 RN7SKP221-201ENST00000410420 301 ntBASIC6.08□□□□□ -1.44
SSX4O60224 AL713922.1-201ENST00000416477 747 ntBASIC6.08□□□□□ -1.44
SSX4O60224 AL121916.1-201ENST00000429405 308 ntBASIC6.08□□□□□ -1.44
SSX4O60224 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX4O60224 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX4O60224 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX4O60224 AC044810.1-201ENST00000480271 711 ntBASIC6.08□□□□□ -1.44
SSX4O60224 RN7SL655P-201ENST00000486087 298 ntBASIC6.08□□□□□ -1.44
SSX4O60224 RN7SL306P-201ENST00000492941 296 ntBASIC6.08□□□□□ -1.44
SSX4O60224 H3F3AP3-201ENST00000497682 407 ntBASIC6.08□□□□□ -1.44
SSX4O60224 OR52A4P-203ENST00000498233 1014 ntBASIC6.08□□□□□ -1.44
SSX4O60224 RN7SL775P-201ENST00000498361 336 ntBASIC6.08□□□□□ -1.44
SSX4O60224 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX4O60224 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
SSX4O60224 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX4O60224 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.08□□□□□ -1.44
SSX4O60224 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.08□□□□□ -1.44
SSX4O60224 OR7E154P-201ENST00000525174 932 ntBASIC6.08□□□□□ -1.44
SSX4O60224 WDR45BP1-201ENST00000583470 1029 ntBASIC6.08□□□□□ -1.44
SSX4O60224 AC087575.1-201ENST00000585087 229 ntBASIC6.08□□□□□ -1.44
SSX4O60224 OR7A11P-201ENST00000597719 953 ntBASIC6.08□□□□□ -1.44
SSX4O60224 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX4O60224 AC073389.3-201ENST00000609434 935 ntBASIC6.08□□□□□ -1.44
SSX4O60224 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX4O60224 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.08□□□□□ -1.44
SSX4O60224 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.08□□□□□ -1.44
SSX4O60224 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX4O60224 AL354702.2-202ENST00000641481 890 ntBASIC6.08□□□□□ -1.44
SSX4O60224 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX4O60224 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SSX4O60224 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.08□□□□□ -1.44
SSX4O60224 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.08□□□□□ -1.44
SSX4O60224 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.08□□□□□ -1.44
SSX4O60224 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SSX4O60224 AC004023.1-201ENST00000561473 1744 ntBASIC6.08□□□□□ -1.44
SSX4O60224 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SSX4O60224 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.08□□□□□ -1.44
SSX4O60224 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SSX4O60224 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX4O60224 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX4O60224 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.07□□□□□ -1.44
SSX4O60224 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.07□□□□□ -1.44
SSX4O60224 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX4O60224 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX4O60224 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX4O60224 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX4O60224 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX4O60224 ARSFP1-201ENST00000398758 477 ntBASIC6.07□□□□□ -1.44
SSX4O60224 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX4O60224 OOSP1-201ENST00000398992 1270 ntBASIC6.07□□□□□ -1.44
SSX4O60224 SNORA11.5-201ENST00000408163 128 ntBASIC6.07□□□□□ -1.44
SSX4O60224 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.07□□□□□ -1.44
SSX4O60224 RANP7-201ENST00000418085 644 ntBASIC6.07□□□□□ -1.44
SSX4O60224 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.07□□□□□ -1.44
SSX4O60224 AC104698.1-201ENST00000435671 276 ntBASIC6.07□□□□□ -1.44
SSX4O60224 HMGN1P32-201ENST00000441744 256 ntBASIC6.07□□□□□ -1.44
SSX4O60224 WDR82P2-201ENST00000444540 928 ntBASIC6.07□□□□□ -1.44
SSX4O60224 GOT2P2-201ENST00000450663 1251 ntBASIC6.07□□□□□ -1.44
SSX4O60224 KF459542.1-201ENST00000450908 553 ntBASIC6.07□□□□□ -1.44
SSX4O60224 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.07□□□□□ -1.44
SSX4O60224 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.07□□□□□ -1.44
SSX4O60224 MED28P7-201ENST00000456611 530 ntBASIC6.07□□□□□ -1.44
SSX4O60224 SNRPCP11-201ENST00000492453 205 ntBASIC6.07□□□□□ -1.44
SSX4O60224 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.07□□□□□ -1.44
SSX4O60224 AC147055.1-201ENST00000509261 750 ntBASIC6.07□□□□□ -1.44
SSX4O60224 AC139713.1-202ENST00000512366 460 ntBASIC6.07□□□□□ -1.44
SSX4O60224 SNORA48.9-201ENST00000516419 162 ntBASIC6.07□□□□□ -1.44
SSX4O60224 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.07□□□□□ -1.44
SSX4O60224 AC110056.1-201ENST00000525759 911 ntBASIC6.07□□□□□ -1.44
SSX4O60224 BTG1P1-201ENST00000540396 508 ntBASIC6.07□□□□□ -1.44
SSX4O60224 AC069240.2-201ENST00000550242 609 ntBASIC6.07□□□□□ -1.44
SSX4O60224 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX4O60224 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.07□□□□□ -1.44
SSX4O60224 AC023827.2-201ENST00000566880 1061 ntBASIC6.07□□□□□ -1.44
SSX4O60224 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.07□□□□□ -1.44
SSX4O60224 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.07□□□□□ -1.44
SSX4O60224 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.07□□□□□ -1.44
SSX4O60224 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX4O60224 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.07□□□□□ -1.44
SSX4O60224 AL353729.2-201ENST00000605859 1249 ntBASIC6.07□□□□□ -1.44
SSX4O60224 MIR6889-201ENST00000613185 59 ntBASIC6.07□□□□□ -1.44
SSX4O60224 AC005899.7-201ENST00000618199 588 ntBASIC6.07□□□□□ -1.44
SSX4O60224 AL161420.1-201ENST00000619393 264 ntBASIC6.07□□□□□ -1.44
SSX4O60224 AC012254.5-201ENST00000623573 478 ntBASIC6.07□□□□□ -1.44
SSX4O60224 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.07□□□□□ -1.44
SSX4O60224 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.07□□□□□ -1.44
SSX4O60224 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX4O60224 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SSX4O60224 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms