Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GPC6Q9Y625 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
GPC6Q9Y625 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
GPC6Q9Y625 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
GPC6Q9Y625 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.71■□□□□ 0.59
GPC6Q9Y625 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.71■□□□□ 0.59
GPC6Q9Y625 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GPC6Q9Y625 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.71■□□□□ 0.59
GPC6Q9Y625 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
GPC6Q9Y625 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.71■□□□□ 0.59
GPC6Q9Y625 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.71■□□□□ 0.59
GPC6Q9Y625 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.71■□□□□ 0.59
GPC6Q9Y625 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.71■□□□□ 0.59
GPC6Q9Y625 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.71■□□□□ 0.59
GPC6Q9Y625 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.71■□□□□ 0.59
GPC6Q9Y625 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.71■□□□□ 0.59
GPC6Q9Y625 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
GPC6Q9Y625 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.71■□□□□ 0.59
GPC6Q9Y625 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
GPC6Q9Y625 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.71■□□□□ 0.59
GPC6Q9Y625 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPC6Q9Y625 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPC6Q9Y625 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
GPC6Q9Y625 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.7■□□□□ 0.58
GPC6Q9Y625 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPC6Q9Y625 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPC6Q9Y625 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
GPC6Q9Y625 AC005082.1-201ENST00000413042 2259 ntBASIC18.7■□□□□ 0.58
GPC6Q9Y625 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
GPC6Q9Y625 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GPC6Q9Y625 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
GPC6Q9Y625 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
GPC6Q9Y625 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.7■□□□□ 0.58
GPC6Q9Y625 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.7■□□□□ 0.58
GPC6Q9Y625 AL356652.1-201ENST00000615962 565 ntBASIC18.7■□□□□ 0.58
GPC6Q9Y625 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.7■□□□□ 0.58
GPC6Q9Y625 BX119927.1-201ENST00000636596 1552 ntBASIC18.7■□□□□ 0.58
GPC6Q9Y625 AC073111.5-205ENST00000641717 521 ntBASIC18.7■□□□□ 0.58
GPC6Q9Y625 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPC6Q9Y625 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GPC6Q9Y625 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPC6Q9Y625 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.7■□□□□ 0.58
GPC6Q9Y625 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPC6Q9Y625 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPC6Q9Y625 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.7■□□□□ 0.58
GPC6Q9Y625 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GPC6Q9Y625 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
GPC6Q9Y625 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.69■□□□□ 0.58
GPC6Q9Y625 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.69■□□□□ 0.58
GPC6Q9Y625 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GPC6Q9Y625 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
GPC6Q9Y625 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.69■□□□□ 0.58
GPC6Q9Y625 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.69■□□□□ 0.58
GPC6Q9Y625 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.69■□□□□ 0.58
GPC6Q9Y625 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.69■□□□□ 0.58
GPC6Q9Y625 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.69■□□□□ 0.58
GPC6Q9Y625 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GPC6Q9Y625 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GPC6Q9Y625 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.69■□□□□ 0.58
GPC6Q9Y625 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC6Q9Y625 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms