Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HCFC2Q9Y5Z7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HCFC2Q9Y5Z7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HCFC2Q9Y5Z7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HCFC2Q9Y5Z7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HCFC2Q9Y5Z7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HCFC2Q9Y5Z7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.83■□□□□ 0.93
HCFC2Q9Y5Z7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HCFC2Q9Y5Z7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
HCFC2Q9Y5Z7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HCFC2Q9Y5Z7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HCFC2Q9Y5Z7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.83■□□□□ 0.93
HCFC2Q9Y5Z7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.83■□□□□ 0.93
HCFC2Q9Y5Z7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HCFC2Q9Y5Z7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HCFC2Q9Y5Z7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.83■□□□□ 0.92
HCFC2Q9Y5Z7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HCFC2Q9Y5Z7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HCFC2Q9Y5Z7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HCFC2Q9Y5Z7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
HCFC2Q9Y5Z7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 AC005229.4-201ENST00000610085 2198 ntBASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 AC128688.1-201ENST00000487626 519 ntBASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 PLK5-205ENST00000642079 1969 ntBASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HCFC2Q9Y5Z7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 TFP1-202ENST00000475455 1573 ntBASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 INGX-201ENST00000359239 846 ntBASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 YBX1P10-201ENST00000444752 975 ntBASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 FAM87A-204ENST00000613235 858 ntBASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 FEM1AP4-201ENST00000443167 1987 ntBASIC20.81■□□□□ 0.92
HCFC2Q9Y5Z7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 KRT18P16-201ENST00000510337 1294 ntBASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 AC131212.4-201ENST00000623606 975 ntBASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCFC2Q9Y5Z7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HCFC2Q9Y5Z7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
HCFC2Q9Y5Z7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HCFC2Q9Y5Z7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HCFC2Q9Y5Z7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HCFC2Q9Y5Z7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.79■□□□□ 0.92
HCFC2Q9Y5Z7 AK4P3-201ENST00000418260 669 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms