Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB7Q9Y5E2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB7Q9Y5E2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB7Q9Y5E2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB7Q9Y5E2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB7Q9Y5E2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.42■■□□□ 1.02
PCDHB7Q9Y5E2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHB7Q9Y5E2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.42■■□□□ 1.02
PCDHB7Q9Y5E2 FSCN1P1-201ENST00000568912 1481 ntBASIC21.42■■□□□ 1.02
PCDHB7Q9Y5E2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.42■■□□□ 1.02
PCDHB7Q9Y5E2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHB7Q9Y5E2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.42■■□□□ 1.02
PCDHB7Q9Y5E2 AC007225.1-201ENST00000566331 1836 ntBASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 TFP1-202ENST00000475455 1573 ntBASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 ARMC10P1-201ENST00000313754 855 ntBASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 KRT18P35-201ENST00000510488 1269 ntBASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 AC010947.1-201ENST00000623454 693 ntBASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 AL590326.2-201ENST00000625139 305 ntBASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
PCDHB7Q9Y5E2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 AC113347.1-201ENST00000413321 391 ntBASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 YBX1P10-201ENST00000444752 975 ntBASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 AL445675.2-201ENST00000620291 557 ntBASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHB7Q9Y5E2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
PCDHB7Q9Y5E2 AC018553.1-201ENST00000616682 1458 ntBASIC21.39■■□□□ 1.02
PCDHB7Q9Y5E2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHB7Q9Y5E2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHB7Q9Y5E2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHB7Q9Y5E2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHB7Q9Y5E2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHB7Q9Y5E2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHB7Q9Y5E2 PKD1P6-201ENST00000343738 4769 ntBASIC21.39■■□□□ 1.01
PCDHB7Q9Y5E2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
PCDHB7Q9Y5E2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHB7Q9Y5E2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.39■■□□□ 1.01
PCDHB7Q9Y5E2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB7Q9Y5E2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDHB7Q9Y5E2 AL137013.1-201ENST00000432946 1228 ntBASIC21.39■■□□□ 1.01
PCDHB7Q9Y5E2 TUBB8P6-201ENST00000436895 1288 ntBASIC21.39■■□□□ 1.01
PCDHB7Q9Y5E2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.39■■□□□ 1.01
PCDHB7Q9Y5E2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB7Q9Y5E2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDHB7Q9Y5E2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB7Q9Y5E2 AC092720.2-201ENST00000602388 1665 ntBASIC21.39■■□□□ 1.01
PCDHB7Q9Y5E2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHB7Q9Y5E2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.39■■□□□ 1.01
PCDHB7Q9Y5E2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 AC079834.2-201ENST00000609776 1949 ntBASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms