Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHMP2BQ9UQN3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 BX323043.1-201ENST00000641006 1765 ntBASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 AL031963.3-201ENST00000606441 850 ntBASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP2BQ9UQN3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 CNN2P6-201ENST00000439038 900 ntBASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 AC105020.6-201ENST00000621523 1217 ntBASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP2BQ9UQN3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 KRT16P6-202ENST00000425692 1426 ntBASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 AC068338.2-201ENST00000563278 1430 ntBASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 MIR6821-201ENST00000617625 74 ntBASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP2BQ9UQN3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 KRT18P5-201ENST00000436075 1291 ntBASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 DUX4L16-201ENST00000555130 1264 ntBASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 AC011767.1-201ENST00000617410 1153 ntBASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 AC100791.3-201ENST00000617619 330 ntBASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.13■□□□□ 0.81
CHMP2BQ9UQN3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 KRT8P20-201ENST00000423953 1409 ntBASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP2BQ9UQN3 AC016769.1-201ENST00000409132 1010 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms